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ARATH:WRK30
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | WRKY30 | |
| Protein Name(s) | Probable WRKY transcription factor 30
WRKY DNA-binding protein 30 | |
| External Links | ||
| UniProt | Q9FL62 | |
| EMBL | AF404858 AB010696 CP002688 AK117885 BT005295 AY088401 | |
| RefSeq | NP_568439.1 | |
| UniGene | At.9177 | |
| ProteinModelPortal | Q9FL62 | |
| SMR | Q9FL62 | |
| BioGrid | 17751 | |
| STRING | 3702.AT5G24110.1-P | |
| PRIDE | Q9FL62 | |
| EnsemblPlants | AT5G24110.1 | |
| GeneID | 832476 | |
| KEGG | ath:AT5G24110 | |
| TAIR | AT5G24110 | |
| eggNOG | NOG324005 | |
| HOGENOM | HOG000006380 | |
| InParanoid | Q9FL62 | |
| OMA | NLENNNA | |
| PhylomeDB | Q9FL62 | |
| Proteomes | UP000006548 | |
| Genevestigator | Q9FL62 | |
| GO | GO:0005737 GO:0005634 GO:0043565 GO:0003700 GO:0042542 GO:0010193 GO:0009751 GO:0006351 | |
| Gene3D | 2.20.25.80 | |
| InterPro | IPR003657 | |
| Pfam | PF03106 | |
| SMART | SM00774 | |
| SUPFAM | SSF118290 | |
| PROSITE | PS50811 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000314 |
F |
Figure 2. |
complete | |||||
|
involved_in |
GO:0010150 |
leaf senescence |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042542 |
response to hydrogen peroxide |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010193 |
response to ozone |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009751 |
response to salicylic acid |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
Missing: with/from | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
Missing: with/from | |||
|
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001593849 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001593849 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001593849 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001593849 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Van Aken, O et al. (2013) AtWRKY40 and AtWRKY63 modulate the expression of stress-responsive nuclear genes encoding mitochondrial and chloroplast proteins. Plant Physiol. 162 254-71 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Besseau, S et al. (2012) WRKY54 and WRKY70 co-operate as negative regulators of leaf senescence in Arabidopsis thaliana. J. Exp. Bot. 63 2667-79 PubMed GONUTS page
- ↑ 3.0 3.1 Inzé, A et al. (2012) A subcellular localization compendium of hydrogen peroxide-induced proteins. Plant Cell Environ. 35 308-20 PubMed GONUTS page
- ↑ Riechmann, JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290 2105-10 PubMed GONUTS page
- ↑ Eulgem, T et al. (2000) The WRKY superfamily of plant transcription factors. Trends Plant Sci. 5 199-206 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
