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ARATH:Q7X9H3

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Species (Taxon ID) Arabidopsis thaliana (Mouse-ear cress). (3702)
Gene Name(s) GOA (ECO:0000313 with EMBL:AEE31316.1)
Protein Name(s) MADS-box protein AGL63 (ECO:0000313 with EMBL:AAN52807.1)

MADS-box protein GORDITA (ECO:0000313 with EMBL:AEE31316.1)

External Links
UniProt Q7X9H3
EMBL AY141243
CP002684
RefSeq NP_174399.2
UniGene At.40413
SMR Q7X9H3
IntAct Q7X9H3
STRING 3702.AT1G31140.1-P
EnsemblPlants AT1G31140.1
GeneID 839999
KEGG ath:AT1G31140
TAIR AT1G31140
eggNOG COG5068
HOGENOM HOG000155301
PhylomeDB Q7X9H3
Reactome REACT_206508
Proteomes UP000006548
Genevestigator Q7X9H3
GO GO:0005634
GO:0003677
GO:0003700
GO:0006351
InterPro IPR002487
IPR002100
Pfam PF01486
PF00319
PRINTS PR00404
SMART SM00432
SUPFAM SSF55455
PROSITE PS51297
PS50066

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0030308

negative regulation of cell growth

PMID:20088901[1]

ECO:0000315

P

Figure 3 demonstrates the morphological differences in cell size in wild type and mutants. Note that the size of the loss-of-function mutant cells are larger.

Table 2 quantifies the difference in size, but not in number, indicating that GOA downregulates cell expansion, but has minimal/no effect on cell proliferation.

complete
CACAO 8295

involved_in

GO:0030308

negative regulation of cell growth

PMID:20088901[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0080060

integument development

PMID:20088901[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048530

fruit morphogenesis

PMID:20598091[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048510

regulation of timing of transition from vegetative to reproductive phase

PMID:20598091[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010154

fruit development

PMID:20088901[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:12837945[3]

ECO:0000250

sequence similarity evidence used in manual assertion

F

Seeded From UniProt

Missing: with/from

enables

GO:0003700

DNA-binding transcription factor activity

PMID:11118137[4]

ECO:0000250

sequence similarity evidence used in manual assertion

F

Seeded From UniProt

Missing: with/from

enables

GO:0044212

transcription regulatory region DNA binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000235373
TAIR:locus:2137070

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:106658
PANTHER:PTN000235373
RGD:1559787
TAIR:locus:2041233
TAIR:locus:2121924
TAIR:locus:2152511
UniProtKB:Q38876

F

Seeded From UniProt

complete

involved_in

GO:0010048

vernalization response

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001734045
TAIR:locus:2127213

P

Seeded From UniProt

complete

involved_in

GO:0009909

regulation of flower development

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001734045
TAIR:locus:2165386
UniProtKB:Q9FIS1
UniProtKB:Q9LT93

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000235373
TAIR:locus:2005522
UniProtKB:P11831

F

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000235373
UniProtKB:Q9XJ66

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004101
MGI:MGI:106658
PANTHER:PTN000235373
RGD:1559787
SGD:S000004645
SGD:S000004646
TAIR:locus:2005522
TAIR:locus:2033273
TAIR:locus:2041233
TAIR:locus:2047304
TAIR:locus:2121924
TAIR:locus:2127213
TAIR:locus:2137070
TAIR:locus:2152511
UniProtKB:O22456
UniProtKB:P11831
UniProtKB:P17839
UniProtKB:Q8VXG0
UniProtKB:Q9FPN7
WB:WBGene00006844
ZFIN:ZDB-GENE-990714-29

C

Seeded From UniProt

complete

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033896

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002100
InterPro:IPR036879

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002487

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002487

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002487

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033896

P

Seeded From UniProt

complete

enables

GO:0046983

protein dimerization activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002100
InterPro:IPR036879

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

involved_in

GO:0040008

regulation of growth

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0341

P

Seeded From UniProt

complete

involved_in

GO:0009908

flower development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0287

P

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 1.2 1.3 Prasad, K et al. (2010) The Arabidopsis B-sister MADS-box protein, GORDITA, represses fruit growth and contributes to integument development. Plant J. 62 203-14 PubMed GONUTS page
  2. ↑ 2.0 2.1 Erdmann, R et al. (2010) GORDITA (AGL63) is a young paralog of the Arabidopsis thaliana B(sister) MADS box gene ABS (TT16) that has undergone neofunctionalization. Plant J. 63 914-24 PubMed GONUTS page
  3. ↑ Parenicová, L et al. (2003) Molecular and phylogenetic analyses of the complete MADS-box transcription factor family in Arabidopsis: new openings to the MADS world. Plant Cell 15 1538-51 PubMed GONUTS page
  4. ↑ Riechmann, JL et al. (2000) Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Science 290 2105-10 PubMed GONUTS page
  5. ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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