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YEAST:LSB1
Contents
Species (Taxon ID) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292) | |
Gene Name(s) | LSB1 | |
Protein Name(s) | LAS seventeen-binding protein 1
LAS17-binding protein 1 | |
External Links | ||
UniProt | P53281 | |
EMBL | Z72921 BK006941 | |
PIR | S64445 | |
RefSeq | NP_011652.1 | |
ProteinModelPortal | P53281 | |
SMR | P53281 | |
BioGrid | 33384 | |
DIP | DIP-1863N | |
IntAct | P53281 | |
MINT | MINT-375073 | |
STRING | 4932.YGR136W | |
MaxQB | P53281 | |
PaxDb | P53281 | |
PeptideAtlas | P53281 | |
EnsemblFungi | [example_ID YGR136W] | |
GeneID | 853037 | |
KEGG | sce:YGR136W | |
CYGD | YGR136w | |
SGD | S000003368 | |
eggNOG | NOG136033 | |
GeneTree | ENSGT00510000054224 | |
HOGENOM | HOG000195703 | |
InParanoid | P53281 | |
OMA | SQTKQNV | |
OrthoDB | EOG75MW70 | |
BioCyc | YEAST:G3O-30842-MONOMER | |
NextBio | 972938 | |
Proteomes | UP000002311 | |
Genevestigator | P53281 | |
GO | GO:0030479 GO:0005737 GO:0005634 GO:0034316 | |
InterPro | IPR001452 | |
Pfam | PF00018 | |
PRINTS | PR00452 | |
SMART | SM00326 | |
SUPFAM | SSF50044 | |
PROSITE | PS50002 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0034316 |
negative regulation of Arp2/3 complex-mediated actin nucleation |
ECO:0000314 |
P |
figure 2 show that purified Lsb1 and Lsb2 full-length proteins had an inhibitory activity on Las17-dependent actin polymerization in vitro. These results were further confirmed by measuring the KD constants of their interaction with Las17. |
complete | |||||
GO:0030837 |
negative regulation of actin filament polymerization |
ECO:0000021 |
P |
Figure 2 gives evidence of Lsb1 and Lsb2 inhibiting Las17. Figure 4 shows Lsb1 and Lsb2 are colocalized with Las17, a protein involved in actin polymerization. |
Missing: with/from | |||||
part_of |
GO:0005634 |
nucleus |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034316 |
negative regulation of Arp2/3 complex-mediated actin nucleation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034316 |
negative regulation of Arp2/3 complex-mediated actin nucleation |
ECO:0000353 |
physical interaction evidence used in manual assertion |
SGD:S000005707 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034316 |
negative regulation of Arp2/3 complex-mediated actin nucleation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0030479 |
actin cortical patch |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1900027 |
regulation of ruffle assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1346118 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051666 |
actin cortical patch localization |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001037916 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051017 |
actin filament bundle assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001037916 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0051015 |
actin filament binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001037916 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0035091 |
phosphatidylinositol binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000401752 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0032587 |
ruffle membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000401752 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0030479 |
actin cortical patch |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001037916 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005856 |
cytoskeleton |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030479 |
actin cortical patch |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Spiess, M et al. (2013) Lsb1 is a negative regulator of las17 dependent actin polymerization involved in endocytosis. PLoS ONE 8 e61147 PubMed GONUTS page
- ↑ 2.0 2.1 Huh, WK et al. (2003) Global analysis of protein localization in budding yeast. Nature 425 686-91 PubMed GONUTS page
- ↑ 3.0 3.1 Tkach, JM et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat. Cell Biol. 14 966-76 PubMed GONUTS page
- ↑ Kumar, A et al. (2002) Subcellular localization of the yeast proteome. Genes Dev. 16 707-19 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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