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YEAST:LSB1

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Species (Taxon ID) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292)
Gene Name(s) LSB1
Protein Name(s) LAS seventeen-binding protein 1

LAS17-binding protein 1

External Links
UniProt P53281
EMBL Z72921
BK006941
PIR S64445
RefSeq NP_011652.1
ProteinModelPortal P53281
SMR P53281
BioGrid 33384
DIP DIP-1863N
IntAct P53281
MINT MINT-375073
STRING 4932.YGR136W
MaxQB P53281
PaxDb P53281
PeptideAtlas P53281
EnsemblFungi [example_ID YGR136W]
GeneID 853037
KEGG sce:YGR136W
CYGD YGR136w
SGD S000003368
eggNOG NOG136033
GeneTree ENSGT00510000054224
HOGENOM HOG000195703
InParanoid P53281
OMA SQTKQNV
OrthoDB EOG75MW70
BioCyc YEAST:G3O-30842-MONOMER
NextBio 972938
Proteomes UP000002311
Genevestigator P53281
GO GO:0030479
GO:0005737
GO:0005634
GO:0034316
InterPro IPR001452
Pfam PF00018
PRINTS PR00452
SMART SM00326
SUPFAM SSF50044
PROSITE PS50002

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0034316

negative regulation of Arp2/3 complex-mediated actin nucleation

PMID:23577202[1]

ECO:0000314

P

figure 2 show that purified Lsb1 and Lsb2 full-length proteins had an inhibitory activity on Las17-dependent actin polymerization in vitro. These results were further confirmed by measuring the KD constants of their interaction with Las17.

complete
CACAO 7819

GO:0030837

negative regulation of actin filament polymerization

PMID:23577202[1]

ECO:0000021

P

Figure 2 gives evidence of Lsb1 and Lsb2 inhibiting Las17. Figure 4 shows Lsb1 and Lsb2 are colocalized with Las17, a protein involved in actin polymerization.

Missing: with/from
CACAO 8078

part_of

GO:0005634

nucleus

PMID:14562095[2]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:22842922[3]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:22842922[3]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:14562095[2]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:11914276[4]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0034316

negative regulation of Arp2/3 complex-mediated actin nucleation

PMID:23577202[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034316

negative regulation of Arp2/3 complex-mediated actin nucleation

PMID:23577202[1]

ECO:0000353

physical interaction evidence used in manual assertion

SGD:S000005707

P

Seeded From UniProt

complete

involved_in

GO:0034316

negative regulation of Arp2/3 complex-mediated actin nucleation

PMID:23577202[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0030479

actin cortical patch

PMID:23577202[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:23577202[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:1900027

regulation of ruffle assembly

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1346118
PANTHER:PTN000401752

P

Seeded From UniProt

complete

involved_in

GO:0051666

actin cortical patch localization

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001037916
SGD:S000001058
SGD:S000002968

P

Seeded From UniProt

complete

involved_in

GO:0051017

actin filament bundle assembly

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001037916
SGD:S000001058

P

Seeded From UniProt

complete

enables

GO:0051015

actin filament binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001037916
SGD:S000001058

F

Seeded From UniProt

complete

enables

GO:0035091

phosphatidylinositol binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000401752
UniProtKB:Q96HL8

F

Seeded From UniProt

complete

part_of

GO:0032587

ruffle membrane

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000401752
UniProtKB:Q96HL8

C

Seeded From UniProt

complete

part_of

GO:0030479

actin cortical patch

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001037916
SGD:S000001058
SGD:S000003368

C

Seeded From UniProt

complete

part_of

GO:0005856

cytoskeleton

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0206

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0030479

actin cortical patch

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0008

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Spiess, M et al. (2013) Lsb1 is a negative regulator of las17 dependent actin polymerization involved in endocytosis. PLoS ONE 8 e61147 PubMed GONUTS page
  2. 2.0 2.1 Huh, WK et al. (2003) Global analysis of protein localization in budding yeast. Nature 425 686-91 PubMed GONUTS page
  3. 3.0 3.1 Tkach, JM et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat. Cell Biol. 14 966-76 PubMed GONUTS page
  4. Kumar, A et al. (2002) Subcellular localization of the yeast proteome. Genes Dev. 16 707-19 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 5.4 5.5 5.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page