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YEAST:CSM3

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Species (Taxon ID) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292)
Gene Name(s) CSM3
Protein Name(s) Chromosome segregation in meiosis protein 3
External Links
UniProt Q04659
EMBL Z49703
AY558400
BK006946
PIR S54548
RefSeq NP_013763.1
ProteinModelPortal Q04659
BioGrid 35222
DIP DIP-1944N
IntAct Q04659
MINT MINT-400677
STRING 4932.YMR048W
MaxQB Q04659
PaxDb Q04659
EnsemblFungi [example_ID YMR048W]
GeneID 855067
KEGG sce:YMR048W
CYGD YMR048w
SGD S000004651
eggNOG KOG3004
InParanoid Q04659
KO K10998
OrthoDB EOG77WWPP
BioCyc YEAST:G3O-32753-MONOMER
NextBio 978332
Proteomes UP000002311
Genevestigator Q04659
GO GO:0031298
GO:0006281
GO:0000076
GO:0034087
GO:0043570
GO:0045132
GO:0007064
GO:0043111
GO:0048478
InterPro IPR012923
Pfam PF07962
ProDom PD089639

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005737

cytoplasm

PMID:22842922[1]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:14562095[2]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:22842922[1]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0048478

replication fork protection

PMID:16418273[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045132

meiotic chromosome segregation

PMID:11470404[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0043570

maintenance of DNA repeat elements

PMID:18321795[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0043111

replication fork arrest

PMID:16103218[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0043111

replication fork arrest

PMID:16418273[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034087

establishment of mitotic sister chromatid cohesion

PMID:19730685[7]

ECO:0000316

genetic interaction evidence used in manual assertion

SGD:S000000311
SGD:S000001073

P

Seeded From UniProt

complete

involved_in

GO:0034087

establishment of mitotic sister chromatid cohesion

PMID:19730685[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0031298

replication fork protection complex

PMID:16531994[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0007064

mitotic sister chromatid cohesion

PMID:14742714[9]

ECO:0000316

genetic interaction evidence used in manual assertion

SGD:S000001234

P

Seeded From UniProt

complete

involved_in

GO:0007064

mitotic sister chromatid cohesion

PMID:17483413[10]

ECO:0000316

genetic interaction evidence used in manual assertion

SGD:S000000521
SGD:S000000566
SGD:S000001234
SGD:S000004683

P

Seeded From UniProt

complete

involved_in

GO:0007064

mitotic sister chromatid cohesion

PMID:14742714[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007064

mitotic sister chromatid cohesion

PMID:17483413[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

PMID:16219777[11]

ECO:0000316

genetic interaction evidence used in manual assertion

SGD:S000002625

P

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

PMID:16219777[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003674

molecular_function

GO_REF:0000015

ECO:0000307

no biological data found used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0048478

replication fork protection

PMID:21873635[12]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325249
PomBase:SPBC30D10.04
SGD:S000004651

P

Seeded From UniProt

complete

involved_in

GO:0043111

replication fork arrest

PMID:21873635[12]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325249
SGD:S000004651

P

Seeded From UniProt

complete

part_of

GO:0031298

replication fork protection complex

PMID:21873635[12]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325249
SGD:S000004651

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:21873635[12]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325249
PomBase:SPBC30D10.04

F

Seeded From UniProt

complete

involved_in

GO:0000076

DNA replication checkpoint

PMID:21873635[12]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000325249
UniProtKB:Q9BVW5

P

Seeded From UniProt

complete

involved_in

GO:0000076

DNA replication checkpoint

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR040038

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012923

C

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012923

P

Seeded From UniProt

complete

involved_in

GO:0048478

replication fork protection

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR012923

P

Seeded From UniProt

complete

involved_in

GO:0051321

meiotic cell cycle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0469

P

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0234

P

Seeded From UniProt

complete

involved_in

GO:0008156

negative regulation of DNA replication

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0236

P

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

involved_in

GO:0007049

cell cycle

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0131

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 Tkach, JM et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat. Cell Biol. 14 966-76 PubMed GONUTS page
  2. ↑ Huh, WK et al. (2003) Global analysis of protein localization in budding yeast. Nature 425 686-91 PubMed GONUTS page
  3. ↑ 3.0 3.1 Mohanty, BK et al. (2006) The Tof1p-Csm3p protein complex counteracts the Rrm3p helicase to control replication termination of Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. U.S.A. 103 897-902 PubMed GONUTS page
  4. ↑ Rabitsch, KP et al. (2001) A screen for genes required for meiosis and spore formation based on whole-genome expression. Curr. Biol. 11 1001-9 PubMed GONUTS page
  5. ↑ Razidlo, DF & Lahue, RS (2008) Mrc1, Tof1 and Csm3 inhibit CAG.CTG repeat instability by at least two mechanisms. DNA Repair (Amst.) 7 633-40 PubMed GONUTS page
  6. ↑ Calzada, A et al. (2005) Molecular anatomy and regulation of a stable replisome at a paused eukaryotic DNA replication fork. Genes Dev. 19 1905-19 PubMed GONUTS page
  7. ↑ 7.0 7.1 Fernius, J & Marston, AL (2009) Establishment of cohesion at the pericentromere by the Ctf19 kinetochore subcomplex and the replication fork-associated factor, Csm3. PLoS Genet. 5 e1000629 PubMed GONUTS page
  8. ↑ Gambus, A et al. (2006) GINS maintains association of Cdc45 with MCM in replisome progression complexes at eukaryotic DNA replication forks. Nat. Cell Biol. 8 358-66 PubMed GONUTS page
  9. ↑ 9.0 9.1 Mayer, ML et al. (2004) Identification of protein complexes required for efficient sister chromatid cohesion. Mol. Biol. Cell 15 1736-45 PubMed GONUTS page
  10. ↑ 10.0 10.1 Xu, H et al. (2007) Genetic dissection of parallel sister-chromatid cohesion pathways. Genetics 176 1417-29 PubMed GONUTS page
  11. ↑ 11.0 11.1 Redon, C et al. (2006) Genetic analysis of Saccharomyces cerevisiae H2A serine 129 mutant suggests a functional relationship between H2A and the sister-chromatid cohesion partners Csm3-Tof1 for the repair of topoisomerase I-induced DNA damage. Genetics 172 67-76 PubMed GONUTS page
  12. ↑ 12.0 12.1 12.2 12.3 12.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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