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XENLA:Q9DG48

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Species (Taxon ID) Xenopus laevis (African clawed frog). (8355)
Gene Name(s) Sox4 (ECO:0000313 with EMBL:AAG17026.1)
Protein Name(s) Transcription factor Sox4 (ECO:0000313 with EMBL:AAG17026.1)
External Links
UniProt Q9DG48
EMBL AF186844
RefSeq NP_001165672.1
UniGene Xl.686
ProteinModelPortal Q9DG48
SMR Q9DG48
GeneID 100337602
KEGG xla:100337602
CTD 6659
HOVERGEN HBG005040
KO K09268
Gene3D 1.10.30.10
InterPro IPR009071
IPR017386
Pfam PF00505
PIRSF PIRSF038098
SMART SM00398
SUPFAM SSF47095
PROSITE PS50118

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0048048

embryonic eye morphogenesis

PMID:23874955[1]

ECO:0000315

P

Figure 2A

complete
CACAO 10503

involved_in

GO:0048048

embryonic eye morphogenesis

PMID:23874955[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000400811

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000400811

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000734774

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Cizelsky, W et al. (2013) sox4 and sox11 function during Xenopus laevis eye development. PLoS ONE 8 e69372 PubMed GONUTS page