User:Vumh

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
unacceptable	LEGPH:COAE	2016-04-05 10:00:29 CDT	GO:0004140 dephospho-CoA kinase activity (F)	PMID:25449315	ECO:0000314 direct assay evidence used in manual assertion	Dephosphocoenzyme A kinase (DPCK; CoaE) catalyses the phosphorylation of the 3′-hydroxyl group of the ribose moiety of dephospho-CoA.	challenge
unacceptable	BPT4:TERL	2016-04-11 10:41:11 CDT	GO:0098009 virus terminase, large subunit (C)	PMID:19109896	ECO:0000314 direct assay evidence used in manual assertion	Fig 1 of the paper illustrates gp17 as a large terminase.	challenge
unacceptable	ECOLI:RBN	2016-04-11 03:39:06 CDT	GO:0004519 zinc ion binding (F)	PMID:16452444	ECO:0000314 direct assay evidence used in manual assertion	In Fig. 1b, the ZiPD dimerization interface is in the region of helices α1, α2, and α3, and the dimer is arranged with the monomers in a head-to-head fashion with the exosite tails extending away from each other. A narrow cleft is formed jointly by the two monomers in which the active site and metal coordination residues are present.	challenge
unacceptable	AQUAE:DNAG	2016-04-22 20:33:44 CDT	GO:0003896 DNA primase activity (F)	PMID:16285921	ECO:0000314 direct assay evidence used in manual assertion	In figure 1a, The conserved b-sheet surface of the ZBD contacts the RPD, associating via several salt bridges and polar interactions, but is angled away by 45º to form a narrow groove between the two domains.	challenge
unacceptable	9CAUD:A0A0K2FLA2	2016-05-16 20:29:13 CDT	GO:0003896 DNA primase activity (F)	other:GO:0000100	ECO:0000255 match to sequence model evidence used in manual assertion	With an HHPred result of 100% with an e-value of 3.7e-46, the protein expressed in Eyuki130 is homologous to the one expressed in the VF5 strain of A. aeolicus.	challenge
unacceptable	9CAUD:A0A0K2D0G3	2016-05-16 20:48:33 CDT	GO:0098009 virus terminase, large subunit (C)	other:GO:0000100	ECO:0000247 sequence alignment evidence used in manual assertion	Blastp results show homology with Bacillus phage TsarBomba041 with a query coverage of 99% and 73% identity.	challenge

acceptable:0
unacceptable:6
requires_changes:0
flagged:0

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