User:Skoda

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
unacceptable	VIBFI:H1R1D7	2013-09-29 10:37:17 CDT	GO:0006355 regulation of transcription, DNA-dependent (Table 1 shows the luminescence of various litR genotypes.)	PMID:12100554	IMP: Inferred from Mutant Phenotype		challenge
unacceptable	VIBFI:H1R1D7	2013-09-29 10:49:19 CDT	GO:0006351 transcription, DNA-dependent (Table 2: shows the effect of LitR on the luminescence response using a beta-galactosidase assay. )	PMID:12100554	IDA: Inferred from Direct Assay		challenge
updatedbyinstructor	VIBF1:Q5E2S4	2013-10-10 15:07:49 CDT	GO:0010628 positive regulation of gene expression (P)	PMID:12100554	ECO:0000314 direct assay evidence used in manual assertion	Table 2: shows the effect of LitR on the expression of beta-galactosidase.	challenge
acceptable	STAA8:SPA	2013-10-12 17:16:05 CDT	GO:0009405 pathogenesis (P)	PMID:3679545	ECO:0000315 mutant phenotype evidence used in manual assertion	Table 5: shows the survival rates of rats when injected with various concentrations of spa- and spa+ genotypes.	challenge
acceptable	STAA8:HLA	2013-10-12 17:27:34 CDT	GO:0009405 pathogenesis (P)	PMID:3679545	ECO:0000315 mutant phenotype evidence used in manual assertion	Table 4: Shows the effect of Hly- and Hly+ mutant genotypes on the size of skin lesions in rats. This was tested with varying doses of inoculum.	challenge
unacceptable	YEAS6:B5VJJ9	2013-11-10 16:14:02 CST	GO:0016021 integral to membrane (C)	PMID:24184947	ECO:0000314 direct assay evidence used in manual assertion	Figure 5 uses western blotting technique to identify a secondary intracistronic translation initiation site in the ygr257c coding sequence.	challenge
requireschanges	HUMAN:UCP1	2013-11-10 17:22:44 CST	GO:0017077 oxidative phosphorylation uncoupler activity (F)	PMID:24196960	ECO:0000314 direct assay evidence used in manual assertion	Figure 2: Measures the expression of UCP1 and NADH activity in the bacterial membranes and supernatant.	challenge

acceptable:2
unacceptable:3
requires_changes:1
flagged:0

Annotations challenged by Skoda

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history

0 annotations fixed by Skoda

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