GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

User:Me094014

From GONUTS
Jump to: navigation, search

Spring 2012 Open Competition

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
requireschangesSTRMU:SUCP2012-03-26 14:24:14 CDTGO:0005985 sucrose metabolic process (P)PMID:18402606ECO:0000314 direct assay evidence used in manual assertion

(Table 1)biofilms of S. mutans grown with starch in combination with sucrose exhibited biomass in production of the biofilm.

challenge
requireschangesSTRMU:SUCP2012-03-26 14:26:08 CDTGO:0005975 carbohydrate metabolic process (P)PMID:18402606ECO:0000314 direct assay evidence used in manual assertion

Figure 2.   Amylase activity indicated by the amount of reducing sugars released into the medium during incubation of sHA in 1% starch. The amylase activities at 2, 4, and 6 h after salivary pellicle formation were not significantly different from each other. he presence of sucrose alone or in combinations resulted in biofilms displaying four to seven times more biomass, seven to 15 times more total protein, and 10 to 15 times more total EPS than starch or starch + glucose + fructose-grown biofilms (Table 1).

challenge
acceptableECOLI:ENVZ2012-04-14 12:30:37 CDTGO:0046777 protein autophosphorylation (P)PMID:10973966ECO:0000315 mutant phenotype evidence used in manual assertion

EnvZ mutants cannot properly autophosphorylate in Fig 3.

challenge
requireschangesECOLI:ENVZ2012-04-14 12:44:07 CDTGO:0016301 kinase activity (F)PMID:10973966ECO:0000314 direct assay evidence used in manual assertion

Figure 4 and Figure 5. Phosphotransfer from phosphorylated EnvZc and EnvZc(T247X) mutant proteins to OmpR.A. EnvZ-P, phosphorylated EnvZ.


challenge
requireschangesECOLI:ENVZ2012-04-14 13:24:34 CDTGO:0006470 protein dephosphorylation (P)PMID:2656684ECO:0000314 direct assay evidence used in manual assertion

FIG. 7. Autoradiograms showing the time course of dephosphorylation

of EnvZ* mediated by a substoichiometric amount of OmpR.

challenge
requireschangesECOLI:ENVZ2012-04-14 14:07:29 CDTGO:0071229 cellular response to acid (P)PMID:20380141ECO:0000315 mutant phenotype evidence used in manual assertion

Figures 1-5 shows growth rates,and correlation, as the PH increased, survival times for wild type decreased. ensZ mutants survived better than other mutants.

challenge
requireschangesECOLI:ENVZ2012-04-14 15:05:50 CDTGO:0004721 phosphoprotein phosphatase activity (F)PMID:10973966ECO:0000315 mutant phenotype evidence used in manual assertion

figure 7 shows phosphatase activity of mutants relative to wild type

challenge

acceptable:1
unacceptable:0
requires_changes:6
flagged:0

Annotations challenged by Me094014

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history

0 annotations fixed by Me094014


Internal Competition only involving UCF students

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks

acceptable:0
unacceptable:0
requires_changes:0
flagged:0

Annotations challenged by Me094014

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history

0 annotations fixed by Me094014