User:JMJ

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
updatedbyinstructor	RAT:RNF34	2014-09-21 23:50:46 CDT	GO:0061630 ubiquitin protein ligase activity (F)	PMID:25193658	ECO:0000314 direct assay evidence used in manual assertion	Figure 1G	challenge
acceptable	FRG3V:H9XFG5	2014-09-23 20:59:12 CDT	GO:0044165 host cell endoplasmic reticulum (C)	PMID:24356204	ECO:0000314 direct assay evidence used in manual assertion	As shown in Fig. 4(a), 2L-GFP co-localized with specific regions in the ER.	challenge
unacceptable	RHOS4:Q3IVY4	2014-10-21 19:34:23 CDT	GO:0052689 carboxylic ester hydrolase activity (F)	PMID:24832101	ECO:0000314 direct assay evidence used in manual assertion	Table two shows that Rsp3690 catalyzes the hydrolysis of the carboxylic ester group of both 2-naphthyl propionate (16) and 4-nitrophenyl butyrate (17).	challenge
acceptable	HUMAN:CCNK	2014-11-04 20:31:43 CST	GO:2001165 positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (P)	PMID:22988298	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 4	challenge
updatedbyinstructor	HUMAN:CCNK	2014-11-08 13:58:06 CST	GO:0044828 negative regulation by host of viral genome replication (P)	PMID:21555514	ECO:0000314 direct assay evidence used in manual assertion	Figure 2B shows that Cyclin K inhibits HIV-1 gene replication in the presence of Nef.	challenge
updatedbyinstructor	SALTY:TAGAD	2014-11-18 19:37:48 CST	GO:1990594 L-altrarate dehydratase activity (F)	PMID:17649980	ECO:0000314 direct assay evidence used in manual assertion	Table 1	challenge
updatedbyinstructor	SALTY:TAGAD	2014-11-18 19:54:30 CST	GO:0046392 galactarate catabolic process (P)	PMID:17649980	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 2A & 2B	challenge
updatedbyinstructor	SALTY:TAGAD	2014-11-18 20:41:00 CST	GO:1903663 L-altrarate catabolic process (P)	PMID:17649980	ECO:0000315 mutant phenotype evidence used in manual assertion	Figure 2A & 2B.	challenge
updatedbyinstructor	AGRFC:A9CG74	2014-11-18 20:58:59 CST	GO:0008867 galactarate dehydratase activity (F)	PMID:24926996	ECO:0000314 direct assay evidence used in manual assertion	Table 2	challenge
acceptable	AGRRK:B9JNP7	2014-11-18 21:04:22 CST	GO:0008867 galactarate dehydratase activity (F)	PMID:24926996	ECO:0000314 direct assay evidence used in manual assertion	Table 2	challenge
acceptable	RHIE6:B3Q5L5	2014-11-18 21:06:08 CST	GO:0008867 galactarate dehydratase activity (F)	PMID:24926996	ECO:0000314 direct assay evidence used in manual assertion	Table 2	challenge

acceptable:4
unacceptable:1
requires_changes:0
flagged:0

Annotations challenged by JMJ

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
updatedbyinstructor	Vangals, Team Thoth	RHOS4:Q3IVY4	GO:0008081 - phosphoric diester hydrolase activity (F)	PMID:24832101	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 1 fixed by JMJ
updatedbyinstructor	Vangals, Team Thoth	SALTY:TAGAD	GO:0008867 - galactarate dehydratase activity (F)	PMID:17649980	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 3 fixed by JMJ
updatedbyinstructor	Anjali, Team Swanson	TRIVA:A2DMT0	GO:0004575 - sucrose alpha-glucosidase activity (F)	PMID:24972630	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 3 fixed by JSnowden
correctedthroughchallenges	Roosheel, Team Thoth	ZYMMB:I6YWI4	GO:0004341 - gluconolactonase activity (Table 1 pUC9 - empty vector pZVKL1 - pUC9 + gnl gene gnl gene - gluconolactonase)	PMID:1482681	IDA: Inferred from Direct Assay	challenge	C: 1 fixed by JMJ
updatedbyinstructor	Anjali, Team Swanson	RAT:APBA1	GO:0043197 - dendritic spine (C)	PMID:25378388	ECO:0000314 direct assay evidence used in manual assertion	challenge	C: 2 fixed by Isabella

3 annotations fixed by JMJ

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