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TRYB2:JBP2
Contents
| Species (Taxon ID) | Trypanosoma brucei brucei (strain 927/4 GUTat10.1). (185431) | |
| Gene Name(s) | JBP2 | |
| Protein Name(s) | Bifunctional helicase and thymine dioxygenase JBP2
J-binding protein 2 TbJBP2 Probable DNA helicase JBP2 Thymine dioxygenase JBP2 | |
| External Links | ||
| UniProt | Q57X81 | |
| EMBL | AC159421 | |
| RefSeq | XP_846088.1 | |
| ProteinModelPortal | Q57X81 | |
| GeneID | 3658676 | |
| KEGG | tbr:Tb927.7.4650 | |
| eggNOG | COG0553 | |
| InParanoid | Q57X81 | |
| OMA | NFRTAVH | |
| Proteomes | UP000008524 | |
| GO | GO:0005634 GO:0005524 GO:0003677 GO:0004386 GO:0046872 GO:0050341 GO:0070580 | |
| Gene3D | 3.40.50.300 | |
| InterPro | IPR024779 IPR014001 IPR001650 IPR027417 IPR000330 | |
| Pfam | PF00271 PF00176 PF12851 | |
| SMART | SM00487 SM00490 | |
| SUPFAM | SSF52540 | |
| PROSITE | PS51192 PS51194 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0070580 |
base J metabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0070580 |
base J metabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0050341 |
thymine dioxygenase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0070580 |
base J metabolic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0050341 |
thymine dioxygenase activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008198 |
ferrous iron binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
GeneDB:Tb927.11.13640 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0050341 |
thymine dioxygenase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004386 |
helicase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0051213 |
dioxygenase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Cliffe, LJ et al. (2009) JBP1 and JBP2 are two distinct thymidine hydroxylases involved in J biosynthesis in genomic DNA of African trypanosomes. Nucleic Acids Res. 37 1452-62 PubMed GONUTS page
- ↑ 2.0 2.1 DiPaolo, C et al. (2005) Regulation of trypanosome DNA glycosylation by a SWI2/SNF2-like protein. Mol. Cell 17 441-51 PubMed GONUTS page
