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Cacao

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GO:0009253peptidoglycan catabolic processPMID:22289622IDA: Inferred from Direct Assay P
This annotation made on page: 9CAUD:H2D0G4
By: Cakate1 (group Team Purple-A) on 2017-04-09 20:45:04 CDT.



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Team Purple-A5




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Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
ChallengeAlqaffasaa,
Team Trypto-pham
2017-04-16 17:01:21 CDT

Very good summary of the paper, to improve you might want to further specify the results, you may want to choose a table that shows what sort of action this endolysin.

None, yet.
Public
Assessment
Scaruso2017-05-18 09:21:55 CDT

It would be best to add a couple additional words of detail. The table is displaying the results of an experiment testing purified SPN1S endolysin on the various bacterial strains, not, for example, crude lysate. That is an important distinction.

Acceptable
Protein
Publication
Qualifier
Go term
Evidence
With/From
Notes
Unique/Original
Public
Assessment
DanielRenfro2017-04-17 09:36:35 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0016787 hydrolase activity PMID:22289622 IDA: Inferred from Direct Assay F In one of the experiments described, they performed an endolysin assay to test the antimicrobial spectrum of this protein. Table 2 displays the relative lysis activity of SPN1S against certain Gram-positive and Gram-negative bacterial strains. The table shows SPN1S's high relative lysis activity against all the E.coli strains. These results provide evidence that the SPN1S protein has a hydrolase function. complete
CACAO 12590
on 9CAUD:H2D0G4
Flagged
Public
Assessment
DanielRenfro2017-04-17 09:35:28 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0016787 hydrolase activity PMID:22289622 IDA: Inferred from Direct Assay F In one of the experiments described, they tested the antimicrobial spectrum of this protein. Table 2 displays the relative lysis activity of SPN1S against certain Gram-positive and Gram-negative bacterial strains. The table shows SPN1S's high relative lysis activity against all the E.coli strains. These results provide evidence that the SPN1S protein has a hydrolase function. complete
CACAO 12590
on 9CAUD:H2D0G4
Flagged
Public
Assessment
DanielRenfro2017-04-16 17:01:21 CDT

This annotation has been flagged because it has been challenged since last assessment

Flagged
Public
Assessment
Scaruso2017-04-15 21:04:44 CDT

Very good, but I think you can do two things to improve this. The GO term you picked has a more specific child term that applies. Second the notes are correct, but general. Pick one of the experiments in the paper and describe how it shows you the IDA.

Requires Changes
Protein
Publication
Qualifier
Go term
Evidence
With/From
Notes
Unique/Original