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9CAUD:H2D0G4
Contents
Species (Taxon ID) | Salmonella phage SPN1S. (1125653) | |
Gene Name(s) | No Information Provided. | |
Protein Name(s) | Endolysin (ECO:0000313 with EMBL:AEX26904.1) | |
External Links | ||
UniProt | H2D0G4 | |
EMBL | JN391180 | |
RefSeq | YP_005098003.1 | |
PDB | 4OK7 | |
PDBsum | 4OK7 | |
SMR | H2D0G4 | |
GeneID | 11604964 | |
KEGG | vg:11604964 | |
KO | K03791 | |
Proteomes | UP000008488 | |
GO | GO:0004568 GO:0016998 GO:0006032 | |
InterPro | IPR000726 IPR023346 | |
Pfam | PF00182 | |
SUPFAM | SSF53955 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0016787 |
hydrolase activity |
ECO:0000314 |
F |
In one of the experiments described, they performed an endolysin assay to test the antimicrobial spectrum of this protein. Table 2 displays the relative lysis activity of SPN1S against certain Gram-positive and Gram-negative bacterial strains. The table shows SPN1S's high relative lysis activity against all the E.coli strains. These results provide evidence that the SPN1S protein has a hydrolase function. |
complete | |||||
GO:0009253 |
peptidoglycan catabolic process |
ECO:0000314 |
P |
Figure 5 shows a line (A) and histogram(B) that plots the peptidoglycan degradation in Ecoli in response to the introduction of SPN1S endolysin into the sample. The endolysin seems to cleave the glycosydic linkage between the peptidoglycan molecules to reduce the overall optical density. |
complete | |||||
enables |
GO:0004568 |
chitinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006032 |
chitin catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016998 |
cell wall macromolecule catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Lim, JA et al. (2012) Characterization of endolysin from a Salmonella Typhimurium-infecting bacteriophage SPN1S. Res. Microbiol. 163 233-41 PubMed GONUTS page