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GO:0046798viral portal complexPMID:10400794IDA: Inferred from Direct Assay C
This annotation made on page: HHV8P:ORF73
By: Warrierrk (group Team Snorlax) on 2016-04-10 09:40:14 CDT.




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Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
ChallengePowellme,
Team TRUMP2016
2016-04-18 10:07:56 CDT

There needs to be a figure thats supports your findings

0
ChallengePowellme,
Team TRUMP2016
2016-04-18 10:04:35 CDT

There needs to be a figure thats supports your findings

None, yet.
ChallengeBarlowrm,
Team TRUMP2016
2016-04-13 10:19:00 CDT

OH SNAP SON YOUR PMID DOES NOT WORK

You have been stumped by the Trump, making annotations great again 2016.

0
ChallengeE63,
Team Blue A
2016-04-11 22:18:56 CDT

I suggest doing a direct annotation first to the organism that is used in the journal article and then a transfer annotation using ISS since you use the Blast values as supporting evidence.


When I click the PMID Reference, I am directed to a page that says, "PMID:10400794 not found at the PubMed E-Utilities server. Please check that it is a valid ID and/or try again later."

None, yet.
Private
Assessment
JimHu2016-05-16 17:27:53 CDTYou need to be an instructor to view these notes.Unacceptable
Notes
Public
Assessment
DanielRenfro2016-05-05 15:36:25 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0046798 viral portal complex PMID:10400794 IDA: Inferred from Direct Assay C Matched 100% with KSHV LANA (ORF73) (C-terminal domain, octameric ring: cubic crystal form) with an E-value of 5.4E-60. Figure 2 in the PubMed article shows a northern blot analysis done on two KSHV cell lines. Cellular RNA was probed by a 4.3-kb genomic probe which came from GK18 displayed in Figure 1 of the article. The negative control was taken from the total RNA isolated from the RAJI cell line. There was an equal intensity produced from the class I transcript which ended up serving as the loading control. complete
CACAO 11567
on HHV8P:ORF73
Flagged
Public
Assessment
AAJohnson2016-05-05 10:56:01 CDT

I don't see any evidence this is portal.

Unacceptable
Protein
Go term
Notes