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Cacao

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GO:0030541plasmid partitioningGO REF:0000100IGC: Inferred from Genomic Context PMID:25344242 UniProtKB:A0A075M4S3 UniProtKB:A0A0A0PJ25 UniProtKB:A0A0A0PKY3 UniProtKB:S5Y097 UniProtKB:U5PVU6 UniProtKB:U5PXI1 P
This annotation made on page: 9CAUD:A0A0K2D0E3
By: Nmcdon1 (group Team Purple A) on 2016-04-10 07:40:45 CDT.




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Entry TypeChallenging User,GroupTime/DateChallenge ReasonPoints/Assessment
ChallengeAll5,
Team You can't B. cereus		2016-03-30 09:48:32 CDT

This needs to be a transfer annotation.

2
Private
Assessment		Suzialeksander2016-06-17 12:43:58 CDTYou need to be an instructor to view these notes.Unacceptable
Public
Assessment		JimHu2016-05-02 14:46:12 CDT

Not seeing the genomic context aspect of the evidence.

Requires Changes
✔ Protein
✔ Publication
✔ Qualifier
✗ Evidence
✗ Notes
✔ Unique/Original
Public
Assessment		DanielRenfro2016-04-10 19:40:45 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0030541 plasmid partitioning GO_REF:0000100 IGC: Inferred from Genomic Context PMID:25344242

UniProtKB:A0A075M4S3 UniProtKB:A0A0A0PJ25 UniProtKB:A0A0A0PKY3 UniProtKB:S5Y097 UniProtKB:U5PVU6 UniProtKB:U5PXI1

P BLASTP result indicates that the protein encoded by TSARBOMBA_192 is a homolog of ParM protein, the plasmid segregation actin-like motor protein in Bacteria (PMID:12065424, PMID:20844556), of Bacillus phage Troll orf220 (S5Y097) and Bacillus phage Riley orf215 (A0A075M4S3) with 95% Quer cover, 63% identity with e-value of 6e-166.

Several other closely related Bacillus phages were also found to contain genes that encode for plasmid segregation protein as shown on phylogeny tree based on the amino acid sequences in Figure 7A (PMID:25344242). Examples of these include Plasmid segregation protein coded by Bacillus phage Spock orf209 (U5PXI1), Bacillus phage BigBertha orf214 (U5PVU6), and Putative plasmid segregation proteins coded by Bacillus phage Bp8p-T orf27 (A0A0A0PJ25), Bacillus phage Bp8p-C orf27 (A0A0A0PKY3).||complete
CACAO 11440

on 9CAUD:A0A0K2D0E3
Flagged
Public
Assessment		DanielRenfro2016-04-09 17:42:02 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0030541 plasmid partitioning other:GO_REF:0000100 IGC: Inferred from Genomic Context UniProtKB:P11904 P complete
CACAO 11440
on 9CAUD:A0A0K2D0E3
Flagged
Public
Assessment		DanielRenfro2016-04-08 16:10:04 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0030541 plasmid partitioning other:GO_REF:0000100 IGC: Inferred from Genomic Context PMID:12065424

UniProtKB:P11904

P complete
CACAO 11440
on 9CAUD:A0A0K2D0E3
Flagged
Public
Assessment		DanielRenfro2016-04-08 16:06:28 CDT

This annotation has been flagged because it has been edited since last assessment

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0030541 plasmid partitioning other:GO_REF:0000100 IGC: Inferred from Genomic Context PMID:12065424

UniProtKB:ECOLX:PARM

P complete
CACAO 11440
on 9CAUD:A0A0K2D0E3
Flagged


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