GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
Cacao
| GO:0030570 | pectate lyase activity | PMID:25286843 | ISA: Inferred from Sequence Alignment UniProtKB:P0C1A7 | F | ||||
| This annotation made on page: CLOTH:A3DHD2 By: JSnowden (group Team Sexyback) on 2014-10-21 20:45:18 CDT. | ||||||||
You must be logged in to challenge this annotation.
| Entry Type | Challenging User,Group | Time/Date | Challenge Reason | Points/Assessment |
|---|---|---|---|---|
| Challenge | Anjali, Team Groot | 2014-10-31 11:55:32 CDT | The GO term is incorrect, given the evidence in the paper. A better term would be GO:0048028 for polygalacturan binding or GO:0030248 for cellulose binding, however, those are binding terms and not acceptable .At the end of section 3.5, the author describes the method with which they tested this protein for enzymatic activity. Under a variety of conditions and with a variety of substrates, the assay showed no activity. In the conclusion, the author states that it is possible that this family of proteins may have no enzymatic activity, and may use calcium for folding or binding. | 2 |
| Private Assessment | Suzialeksander | 2014-10-31 15:10:30 CDT | You need to be an instructor to view these notes. | Unacceptable |
| Public Assessment | DanielRenfro | 2014-10-31 11:55:32 CDT | This annotation has been flagged because it has been edited since last assessment ||GO:0030570||pectate lyase activity||PMID:25286843||ISA: Inferred from Sequence Alignment||UniProtKB:P0C1A7 ||F||Fig4 panel B shows alignment of Cthe_2159 with D. dadantii Pectate lyase PelL. Despite very low identity for the rest of the protein, residues coordinating calcium in the primary calcium-binding site (Ca1) for Cthe_2159 and Pel9A and potential catalytic lysine side chains are nearly superimposable||complete | Flagged |
| Private Assessment | Suzialeksander | 2014-10-27 14:48:52 CDT | You need to be an instructor to view these notes. | Unacceptable ✗ Publication |
| Private Assessment | Suzialeksander | 2014-10-23 15:32:06 CDT | You need to be an instructor to view these notes. | Flagged |
