GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
CLOTH:A3DHD2
Contents
| Species (Taxon ID) | Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridiumthermocellum). (203119) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | Uncharacterized protein (ECO:0000313 with EMBL:ABN53361.1) | |
| External Links | ||
| UniProt | A3DHD2 | |
| EMBL | CP000568 | |
| RefSeq | YP_001038554.1 | |
| PDB | 4PEU 4PHB | |
| PDBsum | 4PEU 4PHB | |
| STRING | 203119.Cthe_2159 | |
| EnsemblBacteria | ABN53361 | |
| GeneID | 4811207 | |
| KEGG | cth:Cthe_2159 | |
| PATRIC | 19518252 | |
| eggNOG | NOG12793 | |
| OMA | RDDITIK | |
| OrthoDB | EOG65QWD9 | |
| BioCyc | CTHE203119:GIW8-2221-MONOMER | |
| Proteomes | UP000002145 | |
| InterPro | IPR025584 | |
| Pfam | PF14262 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0030570 |
pectate lyase activity |
ECO:0000247 |
|
F |
Fig4 panel B shows alignment of Cthe_2159 with D. dadantii Pectate lyase PelL. Despite very low identity for the rest of the protein, residues coordinating calcium in the primary calcium-binding site (Ca1) for Cthe_2159 and Pel9A and potential catalytic lysine side chains are nearly superimposable |
complete | ||||
|
NOT|enables |
GO:0008810 |
cellulase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
NOT|involved_in |
GO:0030245 |
cellulose catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
NOT|involved_in |
GO:0045490 |
pectin catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
NOT|enables |
GO:0047490 |
pectin lyase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0048028 |
galacturonan binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:2001062 |
xylan binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0030248 |
cellulose binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005509 |
calcium ion binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
b
c
p
