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Category:Team Sexyback

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StatusPageUserDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
acceptablePSEAE:LOLBJSnowden, Team Sexyback2014-11-23 15:17:06 CSTGO:0089705 protein localization to outer membrane (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3B

challenge
acceptablePSEAE:LOLBJSnowden, Team Sexyback2014-11-23 15:17:06 CSTGO:0044874 lipoprotein localization to outer membrane (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3B

challenge
unacceptablePSEAE:Q9HZL6JSnowden, Team Sexyback2014-11-23 15:14:23 CSTGO:0089705 protein localization to outer membrane (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3A

challenge
updatedbyinstructorPSEAE:Q9HZL6JSnowden, Team Sexyback2014-11-23 15:14:23 CSTGO:0044874 lipoprotein localization to outer membrane (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3A

challenge
acceptablePSEAE:Q9HZL8JSnowden, Team Sexyback2014-11-23 15:12:01 CSTGO:0089705 protein localization to outer membrane (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3A

challenge
acceptablePSEAE:Q9HZL8JSnowden, Team Sexyback2014-11-23 15:12:01 CSTGO:0042953 lipoprotein transport (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3A

challenge
unacceptablePSEAE:LOLAJSnowden, Team Sexyback2014-11-23 15:09:56 CSTGO:0089705 protein localization to outer membrane (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3, A&B

challenge
acceptablePSEAE:LOLAJSnowden, Team Sexyback2014-11-23 15:09:56 CSTGO:0044874 lipoprotein localization to outer membrane (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3 A&B

challenge
acceptablePSEAE:LOLAJSnowden, Team Sexyback2014-11-23 15:09:56 CSTGO:0072323 chaperone-mediated protein transport across periplasmic space (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3 A&B

challenge
unacceptablePSEAE:LOLDJSnowden, Team Sexyback2014-11-23 15:02:34 CSTGO:0044874 lipoprotein localization to outer membrane (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3A

challenge
acceptablePSEAE:LOLDJSnowden, Team Sexyback2014-11-23 15:02:33 CSTGO:0089705 protein localization to outer membrane (P)PMID:17350955ECO:0000314 direct assay evidence used in manual assertion

Fig3A

challenge
acceptableBPD31:Q6TM97Tsonyake, Team Sexyback2014-11-23 13:58:28 CSTGO:0039666 virion attachment to host cell pilus (P)PMID:25049409ECO:0000314 direct assay evidence used in manual assertion

Figure 4A

challenge
acceptableBPD31:Q6TM97Tsonyake, Team Sexyback2014-11-23 13:58:28 CSTGO:1903652 modulation by virus of host cytoplasmic transport (P)PMID:25049409ECO:0000314 direct assay evidence used in manual assertion

Fig.4c

challenge
unacceptableECOLI:LOLCJSnowden, Team Sexyback2014-11-23 13:43:54 CSTGO:0005886 plasma membrane (C)PMID:10783239ECO:0000314 direct assay evidence used in manual assertion

Fig2C

challenge
unacceptableECOLI:LOLEJSnowden, Team Sexyback2014-11-23 13:42:29 CSTGO:0005886 plasma membrane (C)PMID:10783239ECO:0000314 direct assay evidence used in manual assertion

Fig2C

challenge
unacceptableECOLI:LOLEJSnowden, Team Sexyback2014-11-23 13:41:03 CSTGO:0089705 protein localization to outer membrane (P)PMID:10783239ECO:0000314 direct assay evidence used in manual assertion

Fig1C

challenge
unacceptableECOLI:LOLEJSnowden, Team Sexyback2014-11-23 13:41:03 CSTGO:0044874 lipoprotein localization to outer membrane (P)PMID:10783239ECO:0000314 direct assay evidence used in manual assertion

Fig1C

challenge
acceptableECOLI:LOLDJSnowden, Team Sexyback2014-11-23 13:36:33 CSTGO:0005886 plasma membrane (C)PMID:10783239ECO:0000314 direct assay evidence used in manual assertion

Fig2C

challenge
flaggedBPD31:Q6TM97Tsonyake, Team Sexyback2014-11-23 13:33:42 CSTGO:0044068 modulation by symbiont of host cellular process (P)PMID:25049409ECO:0000315 mutant phenotype evidence used in manual assertion

Fig. 1c

NTR:11338 modulation by virus of host cell type IV motility

challenge
updatedbyinstructorPSEAE:PILBTsonyake, Team Sexyback2014-11-23 12:07:06 CSTGO:0043107 type IV pilus-dependent motility (P)PMID:25049409ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 3b and c shows the effects of truncated pilb genes. They are unable to restore the twitching ability to the pilB mutant,which implies the deleted regions are necessary for biogenesis of the pili

challenge
acceptableECOLI:LOLAJSnowden, Team Sexyback2014-11-20 16:53:51 CSTGO:0072323 chaperone-mediated protein transport across periplasmic space (P)PMID:7628437ECO:0000314 direct assay evidence used in manual assertion

Fig6

challenge
updatedbyinstructorECOLI:LOLBJSnowden, Team Sexyback2014-11-20 13:54:56 CSTGO:0044874 lipoprotein localization to outer membrane (P)PMID:9384574ECO:0000314 direct assay evidence used in manual assertion

Fig 4; panels C and D

challenge
acceptableECOLI:LOLDJSnowden, Team Sexyback2014-11-20 13:51:51 CSTGO:0044874 lipoprotein localization to outer membrane (P)PMID:10783239ECO:0000315 mutant phenotype evidence used in manual assertion

Fig3, C

challenge
updatedbyinstructorECOLI:LOLAJSnowden, Team Sexyback2014-11-20 13:47:30 CSTGO:0044874 lipoprotein localization to outer membrane (P)PMID:7628437ECO:0000314 direct assay evidence used in manual assertion

Fig6

challenge
updatedbyinstructorCANLF:Q75UL5Tsonyake, Team Sexyback2014-11-18 20:37:59 CSTGO:0030101 natural killer cell activation (P)PMID:23964570ECO:0000314 direct assay evidence used in manual assertion

Figure 5

challenge
updatedbyinstructorCANLF:R9XMN7Tsonyake, Team Sexyback2014-11-18 20:33:50 CSTGO:0030101 natural killer cell activation (P)PMID:23964570ECO:0000314 direct assay evidence used in manual assertion

Figure 5

challenge
unacceptableDROME:HYDJSnowden, Team Sexyback2014-11-18 20:23:44 CSTGO:0061630 ubiquitin protein ligase activity (F)PMID:7708685ECO:0000247 sequence alignment evidence used in manual assertion

Fig 1B shows sequence alignment, including highly conserved cysteine residue necessary for Ubiquitin thioester formation.

challenge
unacceptableYEAST:RSP5JSnowden, Team Sexyback2014-11-18 20:15:30 CSTGO:0061630 ubiquitin protein ligase activity (F)PMID:7708685ECO:0000247 sequence alignment evidence used in manual assertion

Fig 1B shows sequence alignment, including highly conserved cysteine residue necessary for Ubiquitin thioester formation.

challenge
updatedbyinstructorYEAST:RSP5JSnowden, Team Sexyback2014-11-18 20:15:30 CSTGO:0061630 ubiquitin protein ligase activity (F)PMID:7708685ECO:0000315 mutant phenotype evidence used in manual assertion

Fig3 shows evidence for E3 Ubiquitin-protein ligase activty

challenge
unacceptableRAT:UBR5JSnowden, Team Sexyback2014-11-18 20:02:37 CSTGO:0061630 ubiquitin protein ligase activity (F)PMID:7708685ECO:0000247 sequence alignment evidence used in manual assertion

Fig 1B shows sequence alignment, including highly conserved cysteine residue necessary for Ubiquitin thioester formation.

challenge
acceptablePSEAE:FMPOTsonyake, Team Sexyback2014-11-16 18:47:58 CSTGO:0009986 cell surface (C)PMID:25049409ECO:0000314 direct assay evidence used in manual assertion

Fig 4b

challenge
updatedbyinstructorCANLF:Q75UL5Tsonyake, Team Sexyback2014-11-16 18:12:17 CSTGO:0008285 negative regulation of cell proliferation (P)PMID:24950142ECO:0000314 direct assay evidence used in manual assertion

Figure 3

challenge
updatedbyinstructorCANLF:Q75UL5Tsonyake, Team Sexyback2014-11-16 18:09:42 CSTGO:0046427 positive regulation of JAK-STAT cascade (P)PMID:24950142ECO:0000314 direct assay evidence used in manual assertion

Figure 4

challenge
updatedbyinstructorCANLF:R9XMN7Tsonyake, Team Sexyback2014-11-16 18:07:21 CSTGO:0046427 positive regulation of JAK-STAT cascade (P)PMID:23964570ECO:0000314 direct assay evidence used in manual assertion

Figure 6

challenge
updatedbyinstructorCANLF:R9XMN7Tsonyake, Team Sexyback2014-11-16 18:02:49 CSTGO:0008285 negative regulation of cell proliferation (P)PMID:23964570ECO:0000314 direct assay evidence used in manual assertion

Figure 4

challenge
unacceptable9BURK:T0G105JSnowden, Team Sexyback2014-11-04 19:23:11 CSTGO:0034203 glycolipid translocation (Fig8)PMID:24688094ISM: Inferred from Sequence Model UniProtKB:P0AF16
challenge
acceptableECOLI:LOLDJSnowden, Team Sexyback2014-11-04 18:51:30 CSTGO:0089705 protein localization to outer membrane (P)PMID:10783239ECO:0000314 direct assay evidence used in manual assertion

Fig1 C

challenge
unacceptableECOLI:LOLDJSnowden, Team Sexyback2014-11-04 18:37:08 CSTGO:0043190 ATP-binding cassette (ABC) transporter complex (C)PMID:10783239ECO:0000314 direct assay evidence used in manual assertion

Fig1 C

challenge
unacceptableECOLI:LOLBJSnowden, Team Sexyback2014-11-04 18:07:51 CSTGO:0089705 protein localization to outer membrane (P)PMID:9384574ECO:0000314 direct assay evidence used in manual assertion

Fig 4; panels C and D

challenge
unacceptableECOLI:LOLAJSnowden, Team Sexyback2014-11-04 17:44:13 CSTGO:0044874 lipoprotein localization to outer membrane (P)PMID:7628437ECO:0000314 direct assay evidence used in manual assertion

Fig 6

challenge
acceptablePSEAE:PILBTsonyake, Team Sexyback2014-11-04 10:48:52 CSTGO:0048870 cell motility (P)PMID:25049409ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 3c

challenge
acceptablePSEAE:FMPOTsonyake, Team Sexyback2014-11-04 10:47:00 CSTGO:0005829 cytosol (C)PMID:25049409ECO:0000314 direct assay evidence used in manual assertion

Figure 4b

challenge
updatedbyinstructorCANLF:F1PY54Tsonyake, Team Sexyback2014-11-03 15:38:25 CSTGO:0046427 positive regulation of JAK-STAT cascade (P)PMID:24950142ECO:0000314 direct assay evidence used in manual assertion

Figure 4

challenge
updatedbyinstructorCANLF:F1PY54Tsonyake, Team Sexyback2014-10-26 17:47:48 CDTGO:0008285 negative regulation of cell proliferation (P)PMID:24950142ECO:0000314 direct assay evidence used in manual assertion

Figure 3

challenge
acceptableECOLI:MURJJSnowden, Team Sexyback2014-10-22 13:43:25 CDTGO:0034203 glycolipid translocation (P)PMID:25013077ECO:0000315 mutant phenotype evidence used in manual assertion

Fig3 shows that MurJ activity is required for ColM dependent cleavage of lipidII in spheroplasts. When mutant MurJ(A29C) was inactivated with MTSES, flippase activity was reduced to a barely detectable level.

challenge
unacceptableCLOTH:A3DHD2JSnowden, Team Sexyback2014-10-21 20:45:18 CDTGO:0030570 pectate lyase activity (F)PMID:25286843ECO:0000247 sequence alignment evidence used in manual assertion

Fig4 panel B shows alignment of Cthe_2159 with D. dadantii Pectate lyase PelL. Despite very low identity for the rest of the protein, residues coordinating calcium in the primary calcium-binding site (Ca1) for Cthe_2159 and Pel9A and potential catalytic lysine side chains are nearly superimposable

challenge
acceptableACIBA:Q5K1Z4Tsonyake, Team Sexyback2014-09-28 10:34:54 CDTGO:0052150 positive regulation by symbiont of host apoptotic process (P)PMID:25156738ECO:0000314 direct assay evidence used in manual assertion

Figure 2b-d

challenge
acceptableECOLI:LOLCJSnowden, Team Sexyback2014-09-23 20:47:03 CDTGO:0089705 protein localization to outer membrane (P)PMID:12823819ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 6, panel B. Mutant LolC(A40P)DE results in AcrA (an inner membrane protein) being localized to the outer membrane.

challenge

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Pages in category "Team Sexyback"

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