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STRCO:RL11
Contents
| Species (Taxon ID) | Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145). (100226) | |
| Gene Name(s) | rplK (ECO:0000255 with HAMAP-Rule:MF_00736) | |
| Protein Name(s) | 50S ribosomal protein L11 (ECO:0000255 with HAMAP-Rule:MF_00736) | |
| External Links | ||
| UniProt | P0A463 | |
| EMBL | D32254 AB005915 AL939120 | |
| PIR | S54718 | |
| RefSeq | NP_628809.1 | |
| ProteinModelPortal | P0A463 | |
| SMR | P0A463 | |
| STRING | 100226.SCO4648 | |
| PRIDE | P0A463 | |
| EnsemblBacteria | CAB77422 | |
| GeneID | 1100089 | |
| KEGG | sco:SCO4648 | |
| PATRIC | 23739118 | |
| eggNOG | COG0080 | |
| HOGENOM | HOG000082123 | |
| InParanoid | P0A463 | |
| KO | K02867 | |
| OMA | KQFNAKT | |
| OrthoDB | EOG69PQ9D | |
| PhylomeDB | P0A463 | |
| Proteomes | UP000001973 | |
| GO | GO:0005840 GO:0070180 GO:0003735 GO:0006412 | |
| Gene3D | 1.10.10.250 3.30.1550.10 | |
| HAMAP | MF_00736 | |
| InterPro | IPR000911 IPR006519 IPR020783 IPR020785 IPR020784 | |
| PANTHER | PTHR11661 | |
| Pfam | PF00298 PF03946 | |
| SMART | SM00649 | |
| SUPFAM | SSF46906 SSF54747 | |
| TIGRFAMs | TIGR01632 | |
| PROSITE | PS00359 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0003735 |
structural constituent of ribosome |
ECO:0000315 |
F |
Fig. 7: Western blotting showed that ribosomes from the RelC mutant KO-100 contain only one-eighth the amount of L11 protein found in ribosomes of the parent strain. (rplK previously termed relC) |
complete | |||||
|
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0070180 |
large ribosomal subunit rRNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000184007 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0022625 |
cytosolic large ribosomal subunit |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10872 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0019843 |
rRNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10872 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0015934 |
large ribosomal subunit |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10872 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006412 |
translation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10872 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10872 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000027 |
ribosomal large subunit assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10872 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003735 |
structural constituent of ribosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000911 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005840 |
ribosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000911 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006412 |
translation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000911 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006412 |
translation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000034385 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0070180 |
large ribosomal subunit rRNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000034385 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0019843 |
rRNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005840 |
ribosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Ochi, K et al. (1997) Molecular and functional analysis of the ribosomal L11 and S12 protein genes (rplK and rpsL) of Streptomyces coelicolor A3(2). Mol. Gen. Genet. 256 488-98 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
