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SCHPO:YLP3

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Species (Taxon ID) Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). (284812)
Gene Name(s) red1
Protein Name(s) Protein red1

RNA elimination defective protein 1

External Links
UniProt Q9UTR8
EMBL CU329670
AB027946
RefSeq NP_594850.2
BioGrid 279682
IntAct Q9UTR8
MINT MINT-4711180
MaxQB Q9UTR8
EnsemblFungi SPAC1006.03c.1
GeneID 2543254
KEGG spo:SPAC1006.03c
EuPathDB FungiDB:SPAC1006.03c
PomBase SPAC1006.03c
InParanoid Q9UTR8
OrthoDB EOG7DRJBR
PRO PR:Q9UTR8
Proteomes UP000002485
GO GO:1990342
GO:1990251
GO:1990345
GO:0016604
GO:0005634
GO:1990477
GO:0046872
GO:0051447
GO:0033621
GO:1902802
GO:1902801
GO:1902796
InterPro IPR019607
Pfam PF10650

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0005515

protein binding

PMID:21317872[1]

IPI: Inferred from Physical Interaction

UniProtKB:O74958

F

Seeded From UniProt

GO:0005515

protein binding

PMID:21317872[1]

IPI: Inferred from Physical Interaction

UniProtKB:Q10295

F

Seeded From UniProt

GO:0005515

protein binding

PMID:23980030[2]

IPI: Inferred from Physical Interaction

PomBase:SPAC7D4.14c

F

Seeded From UniProt

GO:0005515

protein binding

PMID:24210919[3]

IPI: Inferred from Physical Interaction

UniProtKB:O13799

F

Seeded From UniProt

GO:0005515

protein binding

PMID:24210919[3]

IPI: Inferred from Physical Interaction

UniProtKB:O14269

F

Seeded From UniProt

GO:0005515

protein binding

PMID:24210919[3]

IPI: Inferred from Physical Interaction

UniProtKB:O74958

F

Seeded From UniProt

GO:0005515

protein binding

PMID:24210919[3]

IPI: Inferred from Physical Interaction

UniProtKB:Q10295

F

Seeded From UniProt

GO:0005515

protein binding

PMID:24210919[3]

IPI: Inferred from Physical Interaction

UniProtKB:Q9USP9

F

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

Seeded From UniProt

GO:0005634

nucleus

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

GO:0005634

nucleus

PMID:16823372[4]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0016604

nuclear body

PMID:24210919[3]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0016604

nuclear body

PMID:24713849[5]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0033621

nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts

PMID:21317872[1]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:0033621

nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts

PMID:23980030[2]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:0033621

nuclear-transcribed mRNA catabolic process, meiosis-specific transcripts

PMID:24713849[5]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:0046872

metal ion binding

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0479

F

Seeded From UniProt

GO:0051447

negative regulation of meiotic cell cycle

PMID:21317872[1]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:1902796

regulation of snoRNA processing

PMID:24210919[3]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:1902801

regulation of heterochromatin island assembly

PMID:24210919[3]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:1902802

regulation of heterochromatin domain assembly

PMID:24210919[3]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:1990251

Mmi1 nuclear focus complex

PMID:23980030[2]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:1990342

heterochromatin island

PMID:24713849[5]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:1990345

MTREC complex

PMID:24210919[3]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:1990477

NURS complex

PMID:24713849[5]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:1990342

heterochromatin island

PMID:24210919[3]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0005634

nucleus

PMID:21317872[1]

IDA: Inferred from Direct Assay

C

Microscopic analyses showed that the protein red1 localized to the nucleus of the cell (figure 1A).

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Sugiyama, T & Sugioka-Sugiyama, R (2011) Red1 promotes the elimination of meiosis-specific mRNAs in vegetatively growing fission yeast. EMBO J. 30 1027-39 PubMed GONUTS page
  2. 2.0 2.1 2.2 Yamashita, A et al. (2013) A novel factor Iss10 regulates Mmi1-mediated selective elimination of meiotic transcripts. Nucleic Acids Res. 41 9680-7 PubMed GONUTS page
  3. 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 3.10 Lee, NN et al. (2013) Mtr4-like protein coordinates nuclear RNA processing for heterochromatin assembly and for telomere maintenance. Cell 155 1061-74 PubMed GONUTS page
  4. Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 Egan, ED et al. (2014) Post-transcriptional regulation of meiotic genes by a nuclear RNA silencing complex. RNA 20 867-81 PubMed GONUTS page