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SCHPO:MSH2

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Species (Taxon ID) Schizosaccharomyces pombe (Fission yeast). (taxon:4896)
Gene Name(s) msh2
Protein Name(s)
  • DNA mismatch repair protein msh2
External Links
UniProt Identifier MSH2_SCHPO
UniProt Accessions O74773, O42950,
EMBL AJ006948, CU329671,
PIR T43699,
RefSeq XP_001713136.1,
Pfam PF01624, PF05188, PF05192, PF05190, PF00488,

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000166

nucleotide binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0547

F

GO:0003677

DNA binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0238

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000432

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007695

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007696

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007860

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007861

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011184

F

GO:0005524

ATP binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0067

F

GO:0005634

nucleus

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0539

C

GO:0005634

nucleus

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0191

C

GO:0005634

nucleus

PMID:16823372[1]

IDA: Inferred from Direct Assay

C

GO:0005829

cytosol

PMID:16823372[1]

IDA: Inferred from Direct Assay

C

GO:0006281

DNA repair

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0234

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000432

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007695

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007696

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007860

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007861

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011184

P

GO:0006298

mismatch repair

PMID:9858548[2]

IMP: Inferred from Mutant Phenotype

P

GO:0006298

mismatch repair

PMID:9871115[3]

IGI: Inferred from Genetic Interaction

P

GO:0006974

response to DNA damage stimulus

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0227

P

GO:0007534

gene conversion at mating-type locus

PMID:9858548[2]

IMP: Inferred from Mutant Phenotype

P

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000432

F

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007695

F

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007696

F

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007860

F

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007861

F

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011184

F

GO:0032301

MutSalpha complex

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011184

C

GO:0032302

MutSbeta complex

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR011184

C

GO:0043570

maintenance of DNA repeat elements

PMID:11333219[4]

IMP: Inferred from Mutant Phenotype

P

GO:0051276

chromosome organization

PMID:9858548[2]

IMP: Inferred from Mutant Phenotype

P

GO:0000794

condensed nuclear chromosome

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN26

C

Seeded From PANTHER

GO:0003006

reproductive developmental process

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN161

P

Seeded From PANTHER

GO:0003006

reproductive developmental process

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN26

P

Seeded From PANTHER

GO:0003684

damaged DNA binding

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN159

F

Seeded From PANTHER

GO:0003684

damaged DNA binding

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN26

F

Seeded From PANTHER

GO:0005524

ATP binding

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN161

F

Seeded From PANTHER

GO:0007126

meiosis

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN26

P

Seeded From PANTHER

GO:0016887

ATPase activity

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN161

F

Seeded From PANTHER

GO:0016887

ATPase activity

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN24

F

Seeded From PANTHER

GO:0030983

mismatched DNA binding

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN159

F

Seeded From PANTHER

GO:0030983

mismatched DNA binding

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN24

F

Seeded From PANTHER

GO:0032300

mismatch repair complex

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN161

C

Seeded From PANTHER


Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
  2. 2.0 2.1 2.2 Rudolph, C et al. (1999) The msh2 gene of Schizosaccharomyces pombe is involved in mismatch repair, mating-type switching, and meiotic chromosome organization. Mol. Cell. Biol. 19 241-50 PubMed GONUTS page
  3. Rudolph, C et al. (1998) Schizosaccharomyces pombe exo1 is involved in the same mismatch repair pathway as msh2 and pms1. Curr. Genet. 34 343-50 PubMed GONUTS page
  4. Mansour, AA et al. (2001) Control of GT repeat stability in Schizosaccharomyces pombe by mismatch repair factors. Genetics 158 77-85 PubMed GONUTS page
  5. 5.00 5.01 5.02 5.03 5.04 5.05 5.06 5.07 5.08 5.09 5.10 5.11 Thomas, PD et al. (2007) Ontology annotation: mapping genomic regions to biological function. Curr Opin Chem Biol 11 4-11 PubMed GONUTS page