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SCHPO:IF5A1

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Species (Taxon ID) Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). (284812)
Gene Name(s) tif51a (synonyms: tif51)
Protein Name(s) Eukaryotic translation initiation factor 5A-1

eIF-5A-1

External Links
UniProt P56289
EMBL CU329670
AB009604
PIR T38429
T43305
RefSeq NP_594457.1
ProteinModelPortal P56289
BioGrid 279147
STRING 4896.SPAC26H5.10c.1
iPTMnet P56289
MaxQB P56289
PaxDb P56289
PRIDE P56289
EnsemblFungi SPAC26H5.10c.1
GeneID 2542694
KEGG spo:SPAC26H5.10c
EuPathDB FungiDB:SPAC26H5.10c
PomBase SPAC26H5.10c
HOGENOM HOG000106270
InParanoid P56289
KO K03263
OMA DGYLCLM
PhylomeDB P56289
Reactome R-SPO-204626
PRO PR:P56289
Proteomes UP000002485
GO GO:0005829
GO:0022626
GO:0005730
GO:0005634
GO:0043022
GO:0003746
GO:0008079
GO:0002182
GO:0002184
GO:0045901
GO:0045905
GO:0006452
Gene3D 2.30.30.30
InterPro IPR001884
IPR012340
IPR014722
IPR019769
IPR020189
IPR008991
PANTHER PTHR11673
Pfam PF01287
PIRSF PIRSF003025
SMART SM01376
SUPFAM SSF50104
SSF50249
TIGRFAMs TIGR00037
PROSITE PS00302

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0043022

ribosome binding

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000000760

F

Seeded From UniProt

complete

part_of

GO:0022626

cytosolic ribosome

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000000760

C

Seeded From UniProt

complete

enables

GO:0008079

translation termination factor activity

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000000760

F

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:16823372[1]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

PMID:16823372[1]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:16823372[1]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003746

translation elongation factor activity

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000000760

F

Seeded From UniProt

complete

involved_in

GO:0002184

cytoplasmic translational termination

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000000760

P

Seeded From UniProt

complete

involved_in

GO:0002182

cytoplasmic translational elongation

GO_REF:0000024

ECO:0000266

sequence orthology evidence used in manual assertion

SGD:S000000760

P

Seeded From UniProt

complete

involved_in

GO:0045901

positive regulation of translational elongation

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000186902
SGD:S000000760
SGD:S000003808

P

Seeded From UniProt

complete

enables

GO:0003746

translation elongation factor activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000186902
SGD:S000000760

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001884
InterPro:IPR019769
InterPro:IPR020189

F

Seeded From UniProt

complete

enables

GO:0003746

translation elongation factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001884
InterPro:IPR019769
InterPro:IPR020189

F

Seeded From UniProt

complete

involved_in

GO:0006452

translational frameshifting

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020189

P

Seeded From UniProt

complete

enables

GO:0043022

ribosome binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001884
InterPro:IPR019769
InterPro:IPR020189

F

Seeded From UniProt

complete

involved_in

GO:0045901

positive regulation of translational elongation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001884
InterPro:IPR019769
InterPro:IPR020189

P

Seeded From UniProt

complete

involved_in

GO:0045905

positive regulation of translational termination

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR019769
InterPro:IPR020189

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0006414

translational elongation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0251

P

Seeded From UniProt

complete

involved_in

GO:0006412

translation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0648

P

Seeded From UniProt

complete

enables

GO:0003746

translation elongation factor activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0251

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
  2. 2.0 2.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page