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SCHPO:EXO1
Contents
| Species (Taxon ID) | Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast). (284812) | |
| Gene Name(s) | exo1 | |
| Protein Name(s) | Exodeoxyribonuclease 1
Exodeoxyribonuclease I EXO I Exonuclease I | |
| External Links | ||
| UniProt | P53695 | |
| EMBL | L35174 CU329671 | |
| PIR | T43288 | |
| RefSeq | NP_596050.1 | |
| ProteinModelPortal | P53695 | |
| STRING | P53695 | |
| EnsemblFungi | SPBC29A10.05.1 | |
| GeneID | 2540348 | |
| GenomeReviews | CU329671_GR | |
| KEGG | spo:SPBC29A10.05 | |
| PomBase | SPBC29A10.05 | |
| eggNOG | COG0258 | |
| KO | K10746 | |
| OrthoDB | EOG44QX8J | |
| BioCyc | SPOM-XXX-01:SPOM-XXX-01-004097-MONOMER | |
| NextBio | 20801476 | |
| ArrayExpress | P53695 | |
| GO | GO:0005634 GO:0005819 GO:0008409 GO:0017108 GO:0003690 GO:0046872 GO:0043570 GO:0000706 GO:0006298 GO:0006312 GO:0000723 | |
| InterPro | IPR020045 IPR008918 IPR006086 IPR019974 IPR006085 IPR006084 | |
| PANTHER | PTHR11081 | |
| Pfam | PF00867 PF00752 | |
| PRINTS | PR00853 | |
| SMART | SM00279 SM00484 SM00485 | |
| SUPFAM | SSF47807 | |
| PROSITE | PS00841 PS00842 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | Evidence Code | with/from | Aspect | Notes | Status |
|---|---|---|---|---|---|---|---|---|
| GO:0000706 |
meiotic DNA double-strand break processing |
TAS: Traceable Author Statement |
- |
P |
Seeded From UniProt |
|||
| GO:0000723 |
telomere maintenance |
TAS: Traceable Author Statement |
- |
P |
Seeded From UniProt |
|||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003677 |
DNA binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0003690 |
double-stranded DNA binding |
IDA: Inferred from Direct Assay |
- |
F |
Seeded From UniProt |
|||
| GO:0003824 |
catalytic activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004518 |
nuclease activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004518 |
nuclease activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004518 |
nuclease activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0004527 |
exonuclease activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
ISO: Inferred from Sequence Orthology |
SGD:S000005559 |
C |
Seeded From UniProt |
|||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IEA: Inferred from Electronic Annotation |
C |
Seeded From UniProt |
||||
| GO:0005634 |
nucleus |
IDA: Inferred from Direct Assay |
- |
C |
Seeded From UniProt |
|||
| GO:0005819 |
spindle |
IDA: Inferred from Direct Assay |
- |
C |
Seeded From UniProt |
|||
| GO:0006281 |
DNA repair |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006281 |
DNA repair |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0006298 |
mismatch repair |
IMP: Inferred from Mutant Phenotype |
- |
P |
Seeded From UniProt |
|||
| GO:0006298 |
mismatch repair |
IGI: Inferred from Genetic Interaction |
PomBase:SPAC19G12.02c |
P |
Seeded From UniProt |
|||
| GO:0006298 |
mismatch repair |
IGI: Inferred from Genetic Interaction |
PomBase:SPBC19G7.01c |
P |
Seeded From UniProt |
|||
| GO:0006312 |
mitotic recombination |
TAS: Traceable Author Statement |
- |
P |
Seeded From UniProt |
|||
| GO:0006974 |
response to DNA damage stimulus |
IEA: Inferred from Electronic Annotation |
P |
Seeded From UniProt |
||||
| GO:0008409 |
5'-3' exonuclease activity |
IMP: Inferred from Mutant Phenotype |
- |
F |
Seeded From UniProt |
|||
| GO:0016787 |
hydrolase activity |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0016788 |
hydrolase activity, acting on ester bonds |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
||||
| GO:0017108 |
5'-flap endonuclease activity |
ISO: Inferred from Sequence Orthology |
SGD:S000005559 |
F |
Seeded From UniProt |
|||
| GO:0043570 |
maintenance of DNA repeat elements |
IMP: Inferred from Mutant Phenotype |
- |
P |
Seeded From UniProt |
|||
| GO:0046872 |
metal ion binding |
IEA: Inferred from Electronic Annotation |
F |
Seeded From UniProt |
| |||
| edit table |
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Tran, PT et al. (2004) EXO1-A multi-tasking eukaryotic nuclease. DNA Repair (Amst.) 3 1549-59 PubMed GONUTS page
- ↑ Szankasi, P & Smith, GR (1992) A DNA exonuclease induced during meiosis of Schizosaccharomyces pombe. J. Biol. Chem. 267 3014-23 PubMed GONUTS page
- ↑ 3.0 3.1 Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
- ↑ 4.0 4.1 Szankasi, P & Smith, GR (1995) A role for exonuclease I from S. pombe in mutation avoidance and mismatch correction. Science 267 1166-9 PubMed GONUTS page
- ↑ 5.0 5.1 Rudolph, C et al. (1998) Schizosaccharomyces pombe exo1 is involved in the same mismatch repair pathway as msh2 and pms1. Curr. Genet. 34 343-50 PubMed GONUTS page
- ↑ Mansour, AA et al. (2001) Control of GT repeat stability in Schizosaccharomyces pombe by mismatch repair factors. Genetics 158 77-85 PubMed GONUTS page
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