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RICCO:RICI

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Species (Taxon ID) Ricinus communis (Castor bean). (3988)
Gene Name(s) No Information Provided.
Protein Name(s) Ricin

Ricin A chain rRNA N-glycosidase Linker peptide Ricin B chain

External Links
UniProt P02879
EMBL X03179
X52908
X02388
PIR A24041
RefSeq XP_002534649.1
PDB 1BR5
1BR6
1IFS
1IFT
1IFU
1IL3
1IL4
1IL5
1IL9
1J1M
1OBS
1OBT
1RTC
1UQ4
1UQ5
2AAI
2P8N
2PJO
2R2X
2R3D
2VC3
2VC4
3BJG
3EJ5
3HIO
3LC9
3MK9
3PX8
3PX9
3RTI
3RTJ
3SRP
4ESI
4HUO
4HUP
4HV3
4HV7
4IMV
4KUC
4LGP
4LGR
4LGS
4LHJ
4LHQ
4MX1
4MX5
PDBsum 1BR5
1BR6
1IFS
1IFT
1IFU
1IL3
1IL4
1IL5
1IL9
1J1M
1OBS
1OBT
1RTC
1UQ4
1UQ5
2AAI
2P8N
2PJO
2R2X
2R3D
2VC3
2VC4
3BJG
3EJ5
3HIO
3LC9
3MK9
3PX8
3PX9
3RTI
3RTJ
3SRP
4ESI
4HUO
4HUP
4HV3
4HV7
4IMV
4KUC
4LGP
4LGR
4LGS
4LHJ
4LHQ
4MX1
4MX5
ProteinModelPortal P02879
SMR P02879
BioGrid 1022023
DIP DIP-46421N
IntAct P02879
MINT MINT-8391414
BindingDB P02879
ChEMBL CHEMBL4756
Allergome 2803
CAZy CBM13
UniCarbKB P02879
GeneID 8287993
KEGG rcu:RCOM_2159910
BRENDA 3.2.2.22
EvolutionaryTrace P02879
GO GO:0005783
GO:0030246
GO:0000166
GO:0030598
GO:0006952
GO:0017148
Gene3D 3.40.420.10
4.10.470.10
InterPro IPR001574
IPR017988
IPR016138
IPR016139
IPR017989
IPR000772
Pfam PF00652
PF00161
PRINTS PR00396
SMART SM00458
SUPFAM SSF50370
SSF56371
PROSITE PS50231
PS00275

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0031640

killing of cells of other organism

PMID:22069759[1]

ECO:0000314

P

Ricin toxin binds to the ribosome thereby blocks protein synthesis and cause cell death (Apoptosis). Figure 1 shows a drastic decrease in cell viability with increasing concentration of Ricin.

complete
CACAO 3764

GO:0006915

apoptotic process

PMID:11324424[2]

ECO:0000314

P

Figure 4.

complete
CACAO 4509

GO:0031640

killing of cells of other organism

PMID:11324424[2]

ECO:0000314

P

Figure 4.

complete
CACAO 4601

involved_in

GO:0031640

killing of cells of other organism

PMID:22069759[1]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0009405

pathogenesis

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0090729

P

Seeded From UniProt

complete

involved_in

GO:0017148

negative regulation of translation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001574
InterPro:IPR016138
InterPro:IPR017988
InterPro:IPR036041

P

Seeded From UniProt

complete

enables

GO:0030598

rRNA N-glycosylase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001574
InterPro:IPR016138
InterPro:IPR017988
InterPro:IPR017989
InterPro:IPR036041

F

Seeded From UniProt

complete

enables

GO:0030598

rRNA N-glycosylase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.2.2.22

F

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

PMID:11870775[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0017148

negative regulation of translation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0652

P

Seeded From UniProt

complete

involved_in

GO:0006952

defense response

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0611

P

Seeded From UniProt

complete

enables

GO:0090729

toxin activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0800

F

Seeded From UniProt

complete

enables

GO:0030246

carbohydrate binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0430

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Gage, E et al. (2011) Role of the mannose receptor (CD206) in innate immunity to ricin toxin. Toxins (Basel) 3 1131-45 PubMed GONUTS page
  2. 2.0 2.1 Gan, YH et al. (2000) Molecular mechanism of apoptosis induced by ricin in HeLa cells. Acta Pharmacol. Sin. 21 243-8 PubMed GONUTS page
  3. Maltman, DJ et al. (2002) Proteomic analysis of the endoplasmic reticulum from developing and germinating seed of castor (Ricinus communis). Electrophoresis 23 626-39 PubMed GONUTS page