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RAT:VANG2
Contents
Species (Taxon ID) | Rattus norvegicus (Rat). (10116) | |
Gene Name(s) | Vangl2 (ECO:0000312 with RGD:1309442) | |
Protein Name(s) | Vang-like protein 2
Van Gogh-like protein 2 | |
External Links | ||
UniProt | P84889 | |
EMBL | AABR03084676 | |
RefSeq | NP_001099439.1 XP_006250338.1 XP_006250339.1 | |
UniGene | Rn.198958 | |
ProteinModelPortal | P84889 | |
BioGrid | 252835 | |
IntAct | P84889 | |
MINT | MINT-8416720 | |
STRING | 10116.ENSRNOP00000006849 | |
PhosphoSite | P84889 | |
PaxDb | P84889 | |
PRIDE | P84889 | |
Ensembl | ENSRNOT00000006849 | |
GeneID | 289229 | |
KEGG | rno:289229 | |
UCSC | RGD:1309442 | |
CTD | 57216 | |
RGD | 1309442 | |
eggNOG | NOG268286 | |
GeneTree | ENSGT00390000012496 | |
HOGENOM | HOG000230590 | |
HOVERGEN | HBG058215 | |
InParanoid | P84889 | |
KO | K04510 | |
OMA | MWHRESD | |
OrthoDB | EOG7MSMNR | |
PhylomeDB | P84889 | |
TreeFam | TF313467 | |
Reactome | REACT_198389 REACT_198391 | |
NextBio | 629422 | |
PRO | PR:P84889 | |
Proteomes | UP000002494 | |
Genevestigator | P84889 | |
GO | GO:0016324 GO:0016323 GO:0060187 GO:0005911 GO:0030134 GO:0016021 GO:0016328 GO:0001725 GO:0009952 GO:0045176 GO:0035787 GO:0090103 GO:0060028 GO:0022007 GO:0048546 GO:0048105 GO:0090177 GO:0045197 GO:0032835 GO:0001942 GO:0001947 GO:0060122 GO:0060993 GO:0060490 GO:0003149 GO:0003150 GO:0035058 GO:0060488 GO:0003402 GO:0061346 GO:0090179 GO:0060489 GO:0043507 GO:0036342 GO:0032956 GO:0030111 GO:0007266 GO:0048103 GO:0035019 GO:0042060 | |
InterPro | IPR009539 | |
PANTHER | PTHR20886 | |
Pfam | PF06638 | |
PIRSF | PIRSF007991 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
Colocalizes with |
GO:0016021 |
integral to membrane |
ECO:0000315 |
C |
Figure one: Illustrates the effects of the mutant phenotype in the vangl2 gene. |
complete | ||||
involved_in |
GO:0008150 |
biological_process |
ECO:0000307 |
no biological data found used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005575 |
cellular_component |
ECO:0000307 |
no biological data found used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003674 |
molecular_function |
ECO:0000307 |
no biological data found used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:1905515 |
non-motile cilium assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1904938 |
planar cell polarity pathway involved in axon guidance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090179 |
planar cell polarity pathway involved in neural tube closure |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090177 |
establishment of planar polarity involved in neural tube closure |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090175 |
regulation of establishment of planar polarity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090103 |
cochlea morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090102 |
cochlea development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0071944 |
cell periphery |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061346 |
planar cell polarity pathway involved in heart morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060993 |
kidney morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060490 |
lateral sprouting involved in lung morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060489 |
planar dichotomous subdivision of terminal units involved in lung branching morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060488 |
orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0060187 |
cell pole |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060122 |
inner ear receptor cell stereocilium organization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060119 |
inner ear receptor cell development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060071 |
Wnt signaling pathway, planar cell polarity pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060029 |
convergent extension involved in organogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060028 |
convergent extension involved in axis elongation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048546 |
digestive tract morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048105 |
establishment of body hair planar orientation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048103 |
somatic stem cell division |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045197 |
establishment or maintenance of epithelial cell apical/basal polarity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045176 |
apical protein localization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043507 |
positive regulation of JUN kinase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042060 |
wound healing |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0036515 |
serotonergic neuron axon guidance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0036514 |
dopaminergic neuron axon guidance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0036342 |
post-anal tail morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035787 |
cell migration involved in kidney development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035567 |
non-canonical Wnt signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035019 |
somatic stem cell population maintenance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032956 |
regulation of actin cytoskeleton organization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032835 |
glomerulus development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0030134 |
COPII-coated ER to Golgi transport vesicle |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030111 |
regulation of Wnt signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0022007 |
convergent extension involved in neural plate elongation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0016328 |
lateral plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016324 |
apical plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016323 |
basolateral plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0015012 |
heparan sulfate proteoglycan biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009952 |
anterior/posterior pattern specification |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007266 |
Rho protein signal transduction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005911 |
cell-cell junction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0003402 |
planar cell polarity pathway involved in axis elongation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0003150 |
muscular septum morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0003149 |
membranous septum morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001947 |
heart looping |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001942 |
hair follicle development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001843 |
neural tube closure |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001736 |
establishment of planar polarity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0001725 |
stress fiber |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q91ZD4 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Yin, H et al. (2012) Comparison of phenotypes between different vangl2 mutants demonstrates dominant effects of the Looptail mutation during hair cell development. PLoS ONE 7 e31988 PubMed GONUTS page
a
c
- GO:0005911 ! cell-cell junction
- GO:0005575 ! cellular component
- GO:0035787 ! cell migration involved in kidney development
- GO:0071944 ! cell periphery
- GO:0060187 ! cell pole
- Chordata
- GO:0090102 ! cochlea development
- GO:0090103 ! cochlea morphogenesis
- GO:0060029 ! convergent extension involved in organogenesis
- GO:0022007 ! convergent extension involved in neural plate elongation
- GO:0060028 ! convergent extension involved in axis elongation
- GO:0030134 ! COPII-coated ER to Golgi transport vesicle
- Craniata
e
- GO:0045197 ! establishment or maintenance of epithelial cell apical/basal polarity
- GO:0048105 ! establishment of body hair planar orientation
- GO:0090177 ! establishment of planar polarity involved in neural tube closure
- GO:0001736 ! establishment of planar polarity
- Euarchontoglires
- Eukaryota
- Euteleostomi
- Eutheria
h
i
l
m
n
o
- GO:0061346 ! obsolete planar cell polarity pathway involved in heart morphogenesis
- GO:1904938 ! obsolete planar cell polarity pathway involved in axon guidance
- GO:0003402 ! obsolete planar cell polarity pathway involved in axis elongation
- GO:0090179 ! obsolete planar cell polarity pathway involved in neural tube closure
- GO:0060488 ! orthogonal dichotomous subdivision of terminal units involved in lung branching morphogenesis
p
r
s