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RAT:DYN1

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Species (Taxon ID) Rattus norvegicus (Rat). (10116)
Gene Name(s) Dnm1 (synonyms: Dnm)
Protein Name(s) Dynamin-1

B-dynamin D100 Dynamin, brain

External Links
UniProt P21575
EMBL X54531
CO398357
CB583951
CB708564
PIR S11508
RefSeq NP_542420.1
UniGene Rn.10354
PDB 2AKA
3ZVR
PDBsum 2AKA
3ZVR
ProteinModelPortal P21575
SMR P21575
BioGrid 250837
DIP DIP-30978N
IntAct P21575
MINT MINT-95899
STRING 10116.ENSRNOP00000046016
BindingDB P21575
ChEMBL CHEMBL1075191
PhosphoSite P21575
World-2DPAGE 0004:P21575
PaxDb P21575
PRIDE P21575
Ensembl ENSRNOT00000042762
ENSRNOT00000064039
GeneID 140694
KEGG rno:140694
UCSC RGD:71096
CTD 1759
RGD 71096
eggNOG COG0699
GeneTree ENSGT00760000119213
HOGENOM HOG000161069
HOVERGEN HBG107833
InParanoid P21575
KO K01528
OMA KIKEPCL
OrthoDB EOG76MK7N
PhylomeDB P21575
BRENDA 3.6.5.5
Reactome REACT_198830
REACT_235514
REACT_243437
REACT_247122
REACT_250855
REACT_262886
EvolutionaryTrace P21575
NextBio 620679
PMAP-CutDB P21575
Proteomes UP000002494
ExpressionAtlas P21575
Genevestigator P21575
GO GO:0005794
GO:0030117
GO:0005874
GO:0005886
GO:0043234
GO:0005525
GO:0003924
GO:0042802
GO:0050998
GO:0044822
GO:0008022
GO:0032403
GO:0007032
GO:0031623
GO:0006898
Gene3D 2.30.29.30
3.40.50.300
InterPro IPR027741
IPR000375
IPR001401
IPR019762
IPR022812
IPR030381
IPR003130
IPR020850
IPR027417
IPR001849
IPR011993
PANTHER PTHR11566
PTHR11566:SF32
Pfam PF01031
PF02212
PF00169
PRINTS PR00195
SMART SM00053
SM00302
SM00233
SUPFAM SSF52540
PROSITE PS00410
PS51718
PS51388
PS50003

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0031623

receptor internalization

PMID:11100149[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0098835

presynaptic endocytic zone membrane

PMID:7877693[2]

ECO:0006003

electron microscopy evidence used in manual assertion

C

part_of:(UBERON:0002298)

Seeded From UniProt

complete

part_of

GO:0098835

presynaptic endocytic zone membrane

PMID:7877693[2]

ECO:0006064

cell-free assay evidence used in manual assertion

C

part_of:(UBERON:0002298)

Seeded From UniProt

complete

part_of

GO:0098835

presynaptic endocytic zone membrane

PMID:7877693[2]

ECO:0006062

wide-field fluorescence microscopy evidence used in manual assertion

C

part_of:(UBERON:0002298)

Seeded From UniProt

complete

involved_in

GO:1904645

response to amyloid-beta

PMID:20847448[3]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1903423

positive regulation of synaptic vesicle recycling

PMID:17880892[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1900244

positive regulation of synaptic vesicle endocytosis

PMID:17437541[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1900242

regulation of synaptic vesicle endocytosis

PMID:16648848[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0050998

nitric-oxide synthase binding

PMID:21490139[7]

ECO:0000353

physical interaction evidence used in manual assertion

RGD:3186

F

Seeded From UniProt

complete

part_of

GO:0045202

synapse

PMID:17880892[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0044877

protein-containing complex binding

PMID:9348539[8]

ECO:0000353

physical interaction evidence used in manual assertion

RGD:620274
RGD:621786

F

Seeded From UniProt

complete

enables

GO:0044877

protein-containing complex binding

PMID:11563969[9]

ECO:0000353

physical interaction evidence used in manual assertion

RGD:3980
RGD:61857

F

Seeded From UniProt

complete

enables

GO:0044877

protein-containing complex binding

PMID:17257598[10]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0043196

varicosity

PMID:12646135[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

PMID:17257598[10]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0031749

D2 dopamine receptor binding

PMID:14709338[12]

ECO:0000353

physical interaction evidence used in manual assertion

RGD:2520

F

Seeded From UniProt

complete

enables

GO:0017124

SH3 domain binding

PMID:16648848[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0008022

protein C-terminus binding

PMID:9348539[8]

ECO:0000353

physical interaction evidence used in manual assertion

RGD:621786

F

Seeded From UniProt

complete

enables

GO:0008022

protein C-terminus binding

PMID:9238017[13]

ECO:0000353

physical interaction evidence used in manual assertion

RGD:708456

F

Seeded From UniProt

complete

part_of

GO:0008021

synaptic vesicle

PMID:12646135[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006898

receptor-mediated endocytosis

PMID:12011079[14]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:9725914[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

PMID:9725914[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:9725914[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0002031

G protein-coupled receptor internalization

PMID:14709338[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0098884

postsynaptic neurotransmitter receptor internalization

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949

P

Seeded From UniProt

complete

part_of

GO:0098844

postsynaptic endocytic zone membrane

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949

C

Seeded From UniProt

complete

involved_in

GO:0050803

regulation of synapse structure or activity

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
PANTHER:PTN000170172

P

Seeded From UniProt

complete

part_of

GO:0045211

postsynaptic membrane

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
UniProtKB:P50570

C

Seeded From UniProt

complete

part_of

GO:0045202

synapse

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
PANTHER:PTN000170172
RGD:71096
RGD:727949
WB:WBGene00001130

C

Seeded From UniProt

complete

part_of

GO:0044327

dendritic spine head

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949

C

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949

C

Seeded From UniProt

complete

involved_in

GO:0031623

receptor internalization

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000902093
RGD:71096
UniProtKB:P50570

P

Seeded From UniProt

complete

part_of

GO:0031410

cytoplasmic vesicle

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000902092
WB:WBGene00001130

C

Seeded From UniProt

complete

part_of

GO:0030424

axon

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949
WB:WBGene00001130

C

Seeded From UniProt

complete

involved_in

GO:0016185

synaptic vesicle budding from presynaptic endocytic zone membrane

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
MGI:MGI:107384
MGI:MGI:1341299
PANTHER:PTN000902093

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170013
TAIR:locus:2006777
TAIR:locus:2012763
UniProtKB:Q8S944

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170172
RGD:727949

C

Seeded From UniProt

complete

enables

GO:0008017

microtubule binding

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
PANTHER:PTN000170013

F

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
PANTHER:PTN000902092
RGD:2513
RGD:71096

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003392
MGI:MGI:1921256
PANTHER:PTN000170013
PomBase:SPBC12C2.08
RGD:2513
RGD:628821
RGD:71096
RGD:727949
TAIR:locus:2006777
UniProtKB:K7GKN2
UniProtKB:O00429
UniProtKB:P20591
UniProtKB:P27594
UniProtKB:P79135
UniProtKB:Q8IHR4
dictyBase:DDB_G0277849
dictyBase:DDB_G0277851

C

Seeded From UniProt

complete

enables

GO:0003924

GTPase activity

PMID:21873635[16]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000170013
RGD:2513
RGD:727949
SGD:S000001709
SGD:S000003924
UniProtKB:K7GKN2
UniProtKB:O00429
UniProtKB:O60313
UniProtKB:P27594
UniProtKB:P42697
UniProtKB:Q8S944
WB:WBGene00001130
dictyBase:DDB_G0277849

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:21927001[17]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P21575

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:16432212[18]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P21575

F

Seeded From UniProt

complete

involved_in

GO:1901998

toxin transport

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P39053
ensembl:ENSMUSP00000088618

P

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P39053
ensembl:ENSMUSP00000088618

C

Seeded From UniProt

complete

part_of

GO:0098835

presynaptic endocytic zone membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P39053
ensembl:ENSMUSP00000088618

C

Seeded From UniProt

complete

part_of

GO:0098684

photoreceptor ribbon synapse

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P39053
ensembl:ENSMUSP00000088618

C

Seeded From UniProt

complete

involved_in

GO:0050804

modulation of chemical synaptic transmission

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P39053
ensembl:ENSMUSP00000088618

P

Seeded From UniProt

complete

involved_in

GO:0048488

synaptic vesicle endocytosis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P39053
ensembl:ENSMUSP00000088618

P

Seeded From UniProt

complete

part_of

GO:0030117

membrane coat

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P39053
ensembl:ENSMUSP00000088618

C

Seeded From UniProt

complete

enables

GO:0019901

protein kinase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P39053
ensembl:ENSMUSP00000088618

F

Seeded From UniProt

complete

involved_in

GO:0016185

synaptic vesicle budding from presynaptic endocytic zone membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P39053
ensembl:ENSMUSP00000088618

P

Seeded From UniProt

complete

part_of

GO:0001917

photoreceptor inner segment

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P39053
ensembl:ENSMUSP00000088618

C

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q05193
ensembl:ENSP00000362014

F

Seeded From UniProt

complete

involved_in

GO:0007032

endosome organization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q05193
ensembl:ENSP00000362014

P

Seeded From UniProt

complete

involved_in

GO:0006898

receptor-mediated endocytosis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q05193
ensembl:ENSP00000362014

P

Seeded From UniProt

complete

involved_in

GO:0006897

endocytosis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q05193
ensembl:ENSP00000362014

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q05193
ensembl:ENSP00000362014

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q05193
ensembl:ENSP00000362014

C

Seeded From UniProt

complete

enables

GO:0003924

GTPase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001401
InterPro:IPR003130
InterPro:IPR027741

F

Seeded From UniProt

complete

enables

GO:0005525

GTP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000375
InterPro:IPR001401
InterPro:IPR003130
InterPro:IPR030381

F

Seeded From UniProt

complete

involved_in

GO:0072583

clathrin-dependent endocytosis

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR027741

P

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

PMID:12011079[14]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

Reactome:R-RNO-182041

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005874

microtubule

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0493

C

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005856

cytoskeleton

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0206
UniProtKB-SubCell:SL-0090

C

Seeded From UniProt

complete

involved_in

GO:0006897

endocytosis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0254

P

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0333
UniProtKB-SubCell:SL-0132

C

Seeded From UniProt

complete

enables

GO:0005525

GTP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0342

F

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Lin, JW et al. (2000) Distinct molecular mechanisms and divergent endocytotic pathways of AMPA receptor internalization. Nat. Neurosci. 3 1282-90 PubMed GONUTS page
  2. 2.0 2.1 2.2 Takei, K et al. (1995) Tubular membrane invaginations coated by dynamin rings are induced by GTP-gamma S in nerve terminals. Nature 374 186-90 PubMed GONUTS page
  3. Cao, Y et al. (2010) Changed clathrin regulatory proteins in the brains of Alzheimer's disease patients and animal models. J. Alzheimers Dis. 22 329-42 PubMed GONUTS page
  4. 4.0 4.1 Lu, J et al. (2007) Postsynaptic positioning of endocytic zones and AMPA receptor cycling by physical coupling of dynamin-3 to Homer. Neuron 55 874-89 PubMed GONUTS page
  5. Anggono, V & Robinson, PJ (2007) Syndapin I and endophilin I bind overlapping proline-rich regions of dynamin I: role in synaptic vesicle endocytosis. J. Neurochem. 102 931-43 PubMed GONUTS page
  6. 6.0 6.1 Anggono, V et al. (2006) Syndapin I is the phosphorylation-regulated dynamin I partner in synaptic vesicle endocytosis. Nat. Neurosci. 9 752-60 PubMed GONUTS page
  7. Hyndman, KA et al. (2011) Dynamin activates NO production in rat renal inner medullary collecting ducts via protein-protein interaction with NOS1. Am. J. Physiol. Renal Physiol. 301 F118-24 PubMed GONUTS page
  8. 8.0 8.1 Wigge, P et al. (1997) Amphiphysin heterodimers: potential role in clathrin-mediated endocytosis. Mol. Biol. Cell 8 2003-15 PubMed GONUTS page
  9. Suginta, W et al. (2001) Chloride intracellular channel protein CLIC4 (p64H1) binds directly to brain dynamin I in a complex containing actin, tubulin and 14-3-3 isoforms. Biochem. J. 359 55-64 PubMed GONUTS page
  10. 10.0 10.1 Krendel, M et al. (2007) Myosin 1E interacts with synaptojanin-1 and dynamin and is involved in endocytosis. FEBS Lett. 581 644-50 PubMed GONUTS page
  11. 11.0 11.1 Gray, NW et al. (2003) Dynamin 3 is a component of the postsynapse, where it interacts with mGluR5 and Homer. Curr. Biol. 13 510-5 PubMed GONUTS page
  12. 12.0 12.1 Kabbani, N et al. (2004) Dynamin-2 associates with the dopamine receptor signalplex and regulates internalization of activated D2 receptors. Cell. Signal. 16 497-503 PubMed GONUTS page
  13. Ringstad, N et al. (1997) The SH3p4/Sh3p8/SH3p13 protein family: binding partners for synaptojanin and dynamin via a Grb2-like Src homology 3 domain. Proc. Natl. Acad. Sci. U.S.A. 94 8569-74 PubMed GONUTS page
  14. 14.0 14.1 Ahn, S et al. (2002) Src-dependent tyrosine phosphorylation regulates dynamin self-assembly and ligand-induced endocytosis of the epidermal growth factor receptor. J. Biol. Chem. 277 26642-51 PubMed GONUTS page
  15. 15.0 15.1 15.2 Cao, H et al. (1998) Differential distribution of dynamin isoforms in mammalian cells. Mol. Biol. Cell 9 2595-609 PubMed GONUTS page
  16. 16.00 16.01 16.02 16.03 16.04 16.05 16.06 16.07 16.08 16.09 16.10 16.11 16.12 16.13 16.14 16.15 16.16 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  17. Ford, MG et al. (2011) The crystal structure of dynamin. Nature 477 561-6 PubMed GONUTS page
  18. Wang, G et al. (2006) Nitric oxide regulates endocytosis by S-nitrosylation of dynamin. Proc. Natl. Acad. Sci. U.S.A. 103 1295-300 PubMed GONUTS page