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RAT:BACE1
Contents
Species (Taxon ID) | Rattus norvegicus (Rat). (10116) | |
Gene Name(s) | Bace1 (synonyms: Bace) | |
Protein Name(s) | Beta-secretase 1
Aspartyl protease 2 ASP2 Asp 2 Beta-site amyloid precursor protein cleaving enzyme 1 Beta-site APP cleaving enzyme 1 Memapsin-2 Membrane-associated aspartic protease 2 | |
External Links | ||
UniProt | P56819 | |
EMBL | AF190727 | |
RefSeq | NP_062077.1 | |
UniGene | Rn.207201 | |
ProteinModelPortal | P56819 | |
SMR | P56819 | |
STRING | 10116.ENSRNOP00000022796 | |
MEROPS | A01.004 | |
PRIDE | P56819 | |
Ensembl | ENSRNOT00000022796 | |
GeneID | 29392 | |
KEGG | rno:29392 | |
UCSC | RGD:2191 | |
CTD | 23621 | |
RGD | 2191 | |
eggNOG | NOG71700 | |
GeneTree | ENSGT00760000118929 | |
HOGENOM | HOG000036572 | |
HOVERGEN | HBG059578 | |
InParanoid | P56819 | |
KO | K04521 | |
OMA | YLMSENH | |
OrthoDB | EOG7DNNVW | |
PhylomeDB | P56819 | |
NextBio | 609013 | |
PRO | PR:P56819 | |
Proteomes | UP000002494 | |
Genevestigator | P56819 | |
GO | GO:0030424 GO:0009986 GO:0030659 GO:0005783 GO:0005768 GO:0005794 GO:0005887 GO:0005771 GO:0005802 GO:0004190 GO:0001540 GO:0008233 GO:0050435 GO:0006508 | |
Gene3D | 2.40.70.10 | |
InterPro | IPR001461 IPR001969 IPR009119 IPR009120 IPR021109 | |
PANTHER | PTHR13683 | |
Pfam | PF00026 | |
PRINTS | PR01816 PR01815 PR00792 | |
SUPFAM | SSF50630 | |
PROSITE | PS00141 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0009986 |
cell surface |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004190 |
aspartic-type endopeptidase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0050435 |
amyloid-beta metabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004175 |
endopeptidase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0055037 |
recycling endosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0055037 |
recycling endosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005770 |
late endosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0009986 |
cell surface |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005802 |
trans-Golgi network |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005802 |
trans-Golgi network |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050435 |
amyloid-beta metabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005768 |
endosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004190 |
aspartic-type endopeptidase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:1904646 |
cellular response to amyloid-beta |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071287 |
cellular response to manganese ion |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071280 |
cellular response to copper ion |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060134 |
prepulse inhibition |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050966 |
detection of mechanical stimulus involved in sensory perception of pain |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050435 |
amyloid-beta metabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030425 |
dendrite |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030424 |
axon |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010288 |
response to lead ion |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009314 |
response to radiation |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008233 |
peptidase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0008021 |
synaptic vesicle |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005768 |
endosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050435 |
amyloid-beta metabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002299446 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030163 |
protein catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
CGD:CAL0000201569 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0016020 |
membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1346542 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006509 |
membrane protein ectodomain proteolysis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002299446 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
CGD:CAL0000190503 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005802 |
trans-Golgi network |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1346542 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1346542 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005768 |
endosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1346542 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004190 |
aspartic-type endopeptidase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
CGD:CAL0000196689 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0001540 |
amyloid-beta binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000343246 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000300 |
regulation of synaptic vesicle exocytosis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0098793 |
presynapse |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0098686 |
hippocampal mossy fiber to CA3 synapse |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0055037 |
recycling endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0050804 |
modulation of chemical synaptic transmission |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0050435 |
amyloid-beta metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0031410 |
cytoplasmic vesicle |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0030424 |
axon |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016020 |
membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0009986 |
cell surface |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005802 |
trans-Golgi network |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005769 |
early endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005768 |
endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004190 |
aspartic-type endopeptidase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004175 |
endopeptidase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56818 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0055037 |
recycling endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0050435 |
amyloid-beta metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043525 |
positive regulation of neuron apoptotic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0019899 |
enzyme binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0009986 |
cell surface |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0008233 |
peptidase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006509 |
membrane protein ectodomain proteolysis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005802 |
trans-Golgi network |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005771 |
multivesicular body |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005770 |
late endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005769 |
early endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005768 |
endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005764 |
lysosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004190 |
aspartic-type endopeptidase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004175 |
endopeptidase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0001540 |
amyloid-beta binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P56817 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004190 |
aspartic-type endopeptidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001461 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001461 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0031410 |
cytoplasmic vesicle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005768 |
endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004190 |
aspartic-type endopeptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008233 |
peptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005770 |
late endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030659 |
cytoplasmic vesicle membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045121 |
membrane raft |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0055037 |
recycling endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0009986 |
cell surface |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Zhang, X et al. (2017) miR-124 Regulates the Expression of BACE1 in the Hippocampus Under Chronic Cerebral Hypoperfusion. Mol. Neurobiol. 54 2498-2506 PubMed GONUTS page
- ↑ 2.0 2.1 Lin, R et al. (2008) Exposure to metal ions regulates mRNA levels of APP and BACE1 in PC12 cells: blockage by curcumin. Neurosci. Lett. 440 344-7 PubMed GONUTS page
- ↑ Weber, M et al. (2017) BACE1 across species: a comparison of the in vivo consequences of BACE1 deletion in mice and rats. Sci Rep 7 44249 PubMed GONUTS page
- ↑ Ito, N et al. (2017) miR-15b mediates oxaliplatin-induced chronic neuropathic pain through BACE1 down-regulation. Br. J. Pharmacol. 174 386-395 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 Vassar, R et al. (1999) Beta-secretase cleavage of Alzheimer's amyloid precursor protein by the transmembrane aspartic protease BACE. Science 286 735-41 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Mamada, N et al. (2015) Amyloid β-protein oligomers upregulate the β-secretase, BACE1, through a post-translational mechanism involving its altered subcellular distribution in neurons. Mol Brain 8 73 PubMed GONUTS page
- ↑ Zhou, CC et al. (2018) Lead exposure induces Alzheimers's disease (AD)-like pathology and disturbes cholesterol metabolism in the young rat brain. Toxicol. Lett. 296 173-183 PubMed GONUTS page
- ↑ Jiang, DP et al. (2016) Long-term electromagnetic pulse exposure induces Abeta deposition and cognitive dysfunction through oxidative stress and overexpression of APP and BACE1. Brain Res. 1642 10-19 PubMed GONUTS page
- ↑ Lundgren, JL et al. (2015) ADAM10 and BACE1 are localized to synaptic vesicles. J. Neurochem. 135 606-15 PubMed GONUTS page
- ↑ 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 10.8 10.9 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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