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ORYSJ:SLR1
Contents
| Species (Taxon ID) | Oryza sativa subsp. japonica (Rice). (39947) | |
| Gene Name(s) | SLR1 (synonyms: GAI) | |
| Protein Name(s) | DELLA protein SLR1
Gibberellic acid-insensitive mutant protein OsGAI Protein SLENDER RICE1 | |
| External Links | ||
| UniProt | Q7G7J6 | |
| EMBL | AB030956 AC087797 | |
| RefSeq | NP_001051032.1 | |
| UniGene | Os.4494 | |
| DIP | DIP-59774N | |
| IntAct | Q7G7J6 | |
| MINT | MINT-7943303 | |
| EnsemblPlants | OS03T0707600-01 | |
| GeneID | 4333860 | |
| KEGG | osa:4333860 | |
| Gramene | Q7G7J6 | |
| eggNOG | NOG243696 | |
| InParanoid | Q7G7J6 | |
| KO | K14494 | |
| OMA | VQQENFA | |
| Proteomes | UP000000763 | |
| ExpressionAtlas | Q7G7J6 | |
| GO | GO:0005634 GO:0009740 GO:0006355 GO:0006351 | |
| InterPro | IPR030006 IPR021914 IPR005202 | |
| PANTHER | PTHR31636:SF7 | |
| Pfam | PF12041 PF03514 | |
| PROSITE | PS50985 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0005634 |
nucleus |
ECO:0000314 |
C |
Results section 3.5 and Figure 5 detail that nucleus localization occurs because of a bipartite NLS in the protein. Epifluorescence microscopy was used to determine the localization pattern. |
complete | |||||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:2000377 |
regulation of reactive oxygen species metabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001587404 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:2000033 |
regulation of seed dormancy process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001587404 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000780710 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0042538 |
hyperosmotic salinity response |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001587404 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0010187 |
negative regulation of seed germination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001587404 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009938 |
negative regulation of gibberellic acid mediated signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001587404 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009867 |
jasmonic acid mediated signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001587404 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009863 |
salicylic acid mediated signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001587404 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009737 |
response to abscisic acid |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001587404 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009723 |
response to ethylene |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001587404 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000780710 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000780710 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0003700 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:1903506 |
regulation of nucleic acid-templated transcription |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0003712 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003712 |
transcription coregulator activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009740 |
gibberellic acid mediated signaling pathway |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Ogawa, M et al. (2000) Rice gibberellin-insensitive gene homolog, OsGAI, encodes a nuclear-localized protein capable of gene activation at transcriptional level. Gene 245 21-9 PubMed GONUTS page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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