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ORYSJ:Q8LRC7
Contents
| Species (Taxon ID) | Oryza sativa subsp. japonica (Rice). (39947) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | RING-type E3 ubiquitin transferase (ECO:0000256 with SAAS:SAAS00702733) | |
| External Links | ||
| UniProt | Q8LRC7 | |
| EMBL | AY224536 AP003230 AP008207 AK065307 AP014957 CM000138 | |
| RefSeq | XP_015621922.1 | |
| UniGene | Os.26377 | |
| EnsemblPlants | OS01T0823900-01 | |
| GeneID | 4327575 | |
| Gramene | OS01T0823900-01 | |
| KEGG | osa:4327575 | |
| eggNOG | ENOG410ITMQ ENOG410XQT6 | |
| OMA | ERTIWEL | |
| OrthoDB | EOG093607ET | |
| UniPathway | UPA00143 | |
| Proteomes | UP000059680 | |
| GO | GO:0005737 GO:0005634 GO:0004842 | |
| Gene3D | 1.25.10.10 3.30.40.10 | |
| InterPro | IPR011989 IPR016024 IPR000225 IPR003613 IPR013083 | |
| Pfam | PF00514 PF04564 | |
| SMART | SM00185 SM00504 | |
| SUPFAM | SSF48371 | |
| PROSITE | PS50176 PS51698 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
Colocalizes with |
GO:0000145 |
exocyst |
ECO:0000314 |
C |
Oryza sativa subsp. japonica (Rice), Arm repeat protein, known as osPUB3 in the paper was viewed through Fluorescence microscopy, which showed concentration of protein in the exocyst of the protoplasts in 2nd row of Fig. 3A. SuppF3: "OsPUB2 (XP_015637531) and OsPUB3 (XP_015621922)" |
complete | ||||
|
Colocalizes with |
GO:0000145 |
exocyst |
ECO:0000314 |
C |
Oryza sativa subsp. japonica (Rice), Arm repeat protein, known as osPUB3 (XP_015621922) in the paper was viewed through Fluorescence microscopy, which showed concentration of protein in the exocyst of the protoplasts in 2nd row of Fig. 3A. |
complete | ||||
| GO:0051865 |
protein autoubiquitination |
ECO:0000315 |
P |
Organism Oryza sativa subsp. japonica (Rice), Arm repeat protein, "Myc-OsPUB3 (xp 015621922) and a single amino acid substitution mutant Myc-OsPUB3C280A proteins were used for in vitro self-ubiquitination assay by using anti-Myc and anti-Ub antibodies” by author. In Fig. 2 |
complete | |||||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000593603 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000593603 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004842 |
ubiquitin-protein transferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00143 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Byun, MY et al. (2017) Homologous U-box E3 Ubiquitin Ligases OsPUB2 and OsPUB3 Are Involved in the Positive Regulation of Low Temperature Stress Response in Rice (Oryza sativa L.). Front Plant Sci 8 16 PubMed GONUTS page
- ↑ 2.0 2.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
