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MOUSE:SWI5
Contents
| Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
| Gene Name(s) | Swi5 (synonyms: Sae3) | |
| Protein Name(s) | DNA repair protein SWI5 homolog
Protein SAE3 homolog | |
| External Links | ||
| UniProt | Q8K3D3 | |
| EMBL | AB597964 AK013517 AK166608 AL808027 AL808027 CH466542 BC021748 | |
| CCDS | CCDS50566.1 CCDS71026.1 | |
| RefSeq | NP_001277481.1 NP_780399.1 | |
| UniGene | Mm.27344 | |
| ProteinModelPortal | Q8K3D3 | |
| SMR | Q8K3D3 | |
| BioGrid | 215652 | |
| IntAct | Q8K3D3 | |
| MINT | MINT-4117670 | |
| STRING | 10090.ENSMUSP00000109027 | |
| PhosphoSite | Q8K3D3 | |
| MaxQB | Q8K3D3 | |
| PaxDb | Q8K3D3 | |
| PRIDE | Q8K3D3 | |
| DNASU | 72931 | |
| Ensembl | ENSMUST00000113395 ENSMUST00000113400 ENSMUST00000183946 | |
| GeneID | 72931 | |
| KEGG | mmu:72931 | |
| UCSC | uc008jet.2 uc012bts.1 | |
| CTD | 375757 | |
| MGI | MGI:1920181 | |
| eggNOG | NOG329079 | |
| GeneTree | ENSGT00390000009349 | |
| HOGENOM | HOG000231682 | |
| HOVERGEN | HBG060201 | |
| InParanoid | Q8K3D3 | |
| OrthoDB | EOG79W98D | |
| PhylomeDB | Q8K3D3 | |
| TreeFam | TF336078 | |
| NextBio | 337161 | |
| PRO | PR:Q8K3D3 | |
| Proteomes | UP000000589 | |
| Bgee | Q8K3D3 | |
| CleanEx | MM_2900010J23RIK | |
| ExpressionAtlas | Q8K3D3 | |
| Genevestigator | Q8K3D3 | |
| GO | GO:0005634 GO:0032798 GO:0071479 GO:0000724 | |
| InterPro | IPR010760 | |
| Pfam | PF07061 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0000730 |
DNA recombinase assembly |
ECO:0000270 |
P |
Fig. 2 shows that the SWI5-SFR1 complex functions in stabilization of the Rad51 filament |
complete | |||||
|
involved_in |
GO:0071479 |
cellular response to ionizing radiation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0032798 |
Swi5-Sfr1 complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0071479 |
cellular response to ionizing radiation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002003775 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0032798 |
Swi5-Sfr1 complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1920181 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000730 |
DNA recombinase assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002003775 |
P |
Seeded From UniProt |
complete | ||
|
acts_upstream_of_or_within |
GO:0071479 |
cellular response to ionizing radiation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0032798 |
Swi5-Sfr1 complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
acts_upstream_of_or_within |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Tsai, SP et al. (2012) Rad51 presynaptic filament stabilization function of the mouse Swi5-Sfr1 heterodimeric complex. Nucleic Acids Res. 40 6558-69 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Akamatsu, Y & Jasin, M (2010) Role for the mammalian Swi5-Sfr1 complex in DNA strand break repair through homologous recombination. PLoS Genet. 6 e1001160 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
