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MOUSE:NCOR1

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Ncor1 (synonyms: Rxrip13)
Protein Name(s) Nuclear receptor corepressor 1

N-CoR N-CoR1 Retinoid X receptor-interacting protein 13 RIP13

External Links
UniProt Q60974
EMBL U35312
U22016
PIR S60254
UniGene Mm.271814
Mm.460227
ProteinModelPortal Q60974
SMR Q60974
DIP DIP-32548N
IntAct Q60974
MINT MINT-2981744
PhosphoSite Q60974
MaxQB Q60974
PaxDb Q60974
PRIDE Q60974
MGI MGI:1349717
eggNOG NOG12793
HOVERGEN HBG052587
InParanoid Q60974
Reactome REACT_252217
REACT_27166
ChiTaRS Ncor1
PRO PR:Q60974
Proteomes UP000000589
CleanEx MM_NCOR1
Genevestigator Q60974
GO GO:0005737
GO:0005829
GO:0005654
GO:0005634
GO:0005667
GO:0017053
GO:0003682
GO:0003677
GO:0035033
GO:0019904
GO:0042974
GO:0046965
GO:0043565
GO:0003700
GO:0046966
GO:0003714
GO:0044212
GO:0002361
GO:0042632
GO:0016568
GO:0032922
GO:0060318
GO:0014067
GO:0000122
GO:0045892
GO:0031065
GO:0040014
GO:0006357
GO:0021794
GO:0006351
Gene3D 1.10.10.60
InterPro IPR009057
IPR001005
IPR017884
Pfam PF00249
SMART SM00717
SUPFAM SSF46689
PROSITE PS51293

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:24794873[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045475

locomotor rhythm

PMID:19037247[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:16127449[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0019904

protein domain specific binding

PMID:15175761[4]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q923E4

F

Seeded From UniProt

complete

enables

GO:0046966

thyroid hormone receptor binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1349717
PANTHER:PTN002678500

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1337080
MGI:MGI:1349717
PANTHER:PTN001400465

F

Seeded From UniProt

complete

enables

GO:0042826

histone deacetylase binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001400465
UniProtKB:O75376
UniProtKB:Q9Y618

F

Seeded From UniProt

complete

enables

GO:0035257

nuclear hormone receptor binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1349717
PANTHER:PTN002303952
RGD:1310293
RGD:3612
UniProtKB:O75376

F

Seeded From UniProt

complete

part_of

GO:0017053

transcriptional repressor complex

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0265523
MGI:MGI:1349717
PANTHER:PTN001400465
UniProtKB:O75376
UniProtKB:Q9Y618

C

Seeded From UniProt

complete

colocalizes_with

GO:0016580

Sin3 complex

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002678500
UniProtKB:O75376

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1337080
MGI:MGI:1349717
PANTHER:PTN001400465
PomBase:SPAC22E12.19
RGD:1310293
RGD:3612
SGD:S000000629
UniProtKB:Q9Y618

C

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1337080
MGI:MGI:1349717
PANTHER:PTN001400465
UniProtKB:O75376
UniProtKB:Q9Y618

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0265523
MGI:MGI:1337080
PANTHER:PTN001400465
RGD:1310293
RGD:3612

F

Seeded From UniProt

complete

enables

GO:0001012

RNA polymerase II regulatory region DNA binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001400465
RGD:1310293
RGD:3612

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001400465
PomBase:SPAC22E12.19
SGD:S000000629
UniProtKB:Q9Y618

C

Seeded From UniProt

complete

involved_in

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1337080
MGI:MGI:1349717
PANTHER:PTN001400465
UniProtKB:O75376
UniProtKB:Q9Y618

P

Seeded From UniProt

complete

part_of

GO:0000118

histone deacetylase complex

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1337080
PANTHER:PTN001400465
PomBase:SPAC22E12.19
SGD:S000000629

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1904017

cellular response to Thyroglobulin triiodothyronine

PMID:24550004[6]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1276523

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1903799

negative regulation of production of miRNAs involved in gene silencing by miRNA

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

P

Seeded From UniProt

complete

part_of

GO:0072686

mitotic spindle

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0072368

regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0072362

regulation of glycolytic process by negative regulation of transcription from RNA polymerase II promoter

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060766

negative regulation of androgen receptor signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060318

definitive erythrocyte differentiation

PMID:11030619[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2677822

P

  • occurs_in:(EMAPA:16846)
  • results_in_acquisition_of_features_of:(CL:0000232)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051225

spindle assembly

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

P

Seeded From UniProt

complete

part_of

GO:0048471

perinuclear region of cytoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

C

Seeded From UniProt

complete

enables

GO:0046966

thyroid hormone receptor binding

PMID:19052228[8]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P37242
UniProtKB:Q9Z0Y9

F

Seeded From UniProt

complete

enables

GO:0046966

thyroid hormone receptor binding

PMID:8961273[9]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0046965

retinoid X receptor binding

PMID:8961273[9]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0046965

retinoid X receptor binding

PMID:7760852[10]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0046965

retinoid X receptor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0046329

negative regulation of JNK cascade

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045892

negative regulation of transcription, DNA-templated

PMID:15681609[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045892

negative regulation of transcription, DNA-templated

PMID:15695367[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045892

negative regulation of transcription, DNA-templated

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:17928865[13]

ECO:0000314

direct assay evidence used in manual assertion

F

  • occurs_in:(EMAPA:16910)
  • has_input:(MGI:MGI:95697)|occurs_in(EMAPA:16910)
  • has_input:(MGI:MGI:1277171)

Seeded From UniProt

complete

enables

GO:0042975

peroxisome proliferator activated receptor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

F

Seeded From UniProt

complete

enables

GO:0042974

retinoic acid receptor binding

PMID:8961273[9]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0042974

retinoic acid receptor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

F

Seeded From UniProt

complete

enables

GO:0042826

histone deacetylase binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042632

cholesterol homeostasis

PMID:19052228[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:3821874

P

has_participant:(EMAPA:35770)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0040014

regulation of multicellular organism growth

PMID:19037247[2]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1343091

P

Seeded From UniProt

complete

enables

GO:0035257

nuclear hormone receptor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

F

Seeded From UniProt

complete

enables

GO:0035033

histone deacetylase regulator activity

PMID:15695367[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0035033

histone deacetylase regulator activity

PMID:19037247[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0032922

circadian regulation of gene expression

PMID:19037247[2]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1343091

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0031065

positive regulation of histone deacetylation

PMID:19037247[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0030331

estrogen receptor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0021794

thalamus development

PMID:11030619[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2677822

P

results_in_development_of:(EMAPA:17540)

Seeded From UniProt

complete

enables

GO:0019904

protein domain specific binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

F

Seeded From UniProt

complete

part_of

GO:0017053

transcriptional repressor complex

PMID:17182846[14]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:O09106
UniProtKB:P05627
UniProtKB:P70288
UniProtKB:Q60520
UniProtKB:Q9QYB2

C

Seeded From UniProt

complete

part_of

GO:0017053

transcriptional repressor complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

C

Seeded From UniProt

complete

colocalizes_with

GO:0016580

Sin3 complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0014067

negative regulation of phosphatidylinositol 3-kinase signaling

PMID:17606624[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010629

negative regulation of gene expression

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008284

positive regulation of cell population proliferation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006357

regulation of transcription by RNA polymerase II

PMID:19052228[8]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:98743

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:17606624[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

C

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

PMID:17182846[14]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:O09106
UniProtKB:P05627
UniProtKB:P70288
UniProtKB:Q60520
UniProtKB:Q9QYB2

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:19052228[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:17606624[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:16030140[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:11092755[17]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000008

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

C

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

PMID:7566114[18]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:97856
MGI:MGI:98743

F

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

PMID:11030619[7]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1352467

F

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

GO_REF:0000008

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:17392792[19]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:15681609[11]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:14980219[20]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0002361

CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation

PMID:11030619[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2677822

P

results_in_acquisition_of_features_of:(CL:0000809)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0002155

regulation of thyroid hormone mediated signaling pathway

PMID:24550004[6]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1276523

P

Seeded From UniProt

complete

enables

GO:0001102

RNA polymerase II activating transcription factor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

F

Seeded From UniProt

complete

enables

GO:0001012

RNA polymerase II regulatory region DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3612

F

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:7566114[18]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:97856
MGI:MGI:98743

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:16421255[21]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:107365

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:16030140[16]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:P10037

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:11030619[7]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1352467

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:19299558[22]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:2677822

P

occurs_in:(CL:0000235)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:11328825[23]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

occurs_in:(EMAPA:16846)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

P

Seeded From UniProt

complete

part_of

GO:0000118

histone deacetylase complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:O75376

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR009057

F

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

Reactome:R-NUL-1253330
Reactome:R-NUL-1253318

ECO:0000304

author statement supported by traceable reference used in manual assertion


C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-NUL-9005752
Reactome:R-NUL-9005747
Reactome:R-NUL-1253330
Reactome:R-MMU-5667077
Reactome:R-MMU-5619441
Reactome:R-MMU-5619434
Reactome:R-MMU-5619411
Reactome:R-MMU-5617990
Reactome:R-MMU-5617960
Reactome:R-MMU-556760
Reactome:R-MMU-442515

ECO:0000304

author statement supported by traceable reference used in manual assertion











C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0156

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Aninye, IO et al. (2014) Circadian regulation of Tshb gene expression by Rev-Erbα (NR1D1) and nuclear corepressor 1 (NCOR1). J. Biol. Chem. 289 17070-7 PubMed GONUTS page
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