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MOUSE:GRHL2
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Grhl2 (synonyms: Bom, Tcfcp2l3) | |
Protein Name(s) | Grainyhead-like protein 2 homolog
Brother of mammalian grainyhead Transcription factor CP2-like 3 | |
External Links | ||
UniProt | Q8K5C0 | |
EMBL | AF411213 BC042575 BC055035 | |
CCDS | CCDS27434.1 | |
RefSeq | NP_080772.2 | |
UniGene | Mm.244612 | |
ProteinModelPortal | Q8K5C0 | |
BioGrid | 232985 | |
IntAct | Q8K5C0 | |
MINT | MINT-4117994 | |
STRING | 10090.ENSMUSP00000022895 | |
PhosphoSite | Q8K5C0 | |
PaxDb | Q8K5C0 | |
PRIDE | Q8K5C0 | |
Ensembl | ENSMUST00000022895 | |
GeneID | 252973 | |
KEGG | mmu:252973 | |
UCSC | uc007vne.2 | |
CTD | 79977 | |
MGI | MGI:2182543 | |
eggNOG | NOG241458 | |
GeneTree | ENSGT00760000119235 | |
HOGENOM | HOG000220859 | |
HOVERGEN | HBG054154 | |
InParanoid | Q8K5C0 | |
KO | K09275 | |
OMA | KREQYSA | |
OrthoDB | EOG7GBFWJ | |
PhylomeDB | Q8K5C0 | |
TreeFam | TF314132 | |
NextBio | 387437 | |
PRO | PR:Q8K5C0 | |
Proteomes | UP000000589 | |
Bgee | Q8K5C0 | |
CleanEx | MM_GRHL2 | |
ExpressionAtlas | Q8K5C0 | |
Genevestigator | Q8K5C0 | |
GO | GO:0005634 GO:0003677 GO:0003700 GO:0007420 GO:0043010 GO:0003208 GO:0048701 GO:0042733 GO:0048568 GO:0060324 GO:0001701 GO:0060463 GO:0035264 GO:0001843 GO:0021915 GO:0010468 GO:0006355 GO:0030323 GO:0006351 | |
InterPro | IPR007604 | |
Pfam | PF04516 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0045893 |
positive regulation of transcription, DNA-dependent |
ECO:0000315 |
P |
Fig. 4 shows Down-regulation of Grhl2 affects expression of its target genes. |
complete | |||||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045617 |
negative regulation of keratinocyte differentiation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0044030 |
regulation of DNA methylation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008544 |
epidermis development |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001843 |
neural tube closure |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0001161 |
intronic transcription regulatory region sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001843 |
neural tube closure |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0031490 |
chromatin DNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008544 |
epidermis development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005911 |
cell-cell junction |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070830 |
bicellular tight junction assembly |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034329 |
cell junction assembly |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0003382 |
epithelial cell morphogenesis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051973 |
positive regulation of telomerase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090132 |
epithelium migration |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060487 |
lung epithelial cell differentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0003382 |
epithelial cell morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0259211 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0021915 |
neural tube development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2182543 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007420 |
brain development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2182543 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000867451 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0259211 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0259211 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0035264 |
multicellular organism growth |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0034329 |
cell junction assembly |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0031490 |
chromatin DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0030323 |
respiratory tube development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0021915 |
neural tube development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
results_in_development_of:(EMAPA:16530) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0010468 |
regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0008544 |
epidermis development |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0008283 |
cell population proliferation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0007420 |
brain development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007155 |
cell adhesion |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000247 |
sequence alignment evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005911 |
cell-cell junction |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000247 |
sequence alignment evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003682 |
chromatin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000247 |
sequence alignment evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0003382 |
epithelial cell morphogenesis |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0003208 |
cardiac ventricle morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
has_participant:(EMAPA:17331) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0001843 |
neural tube closure |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4331210 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0001701 |
in utero embryonic development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4331210 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0070830 |
bicellular tight junction assembly |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060672 |
epithelial cell morphogenesis involved in placental branching |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4340678 |
P |
results_in_morphogenesis_of:(EMAPA:31873) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0060463 |
lung lobe morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0060324 |
face development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0051973 |
positive regulation of telomerase activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0048701 |
embryonic cranial skeleton morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0048568 |
embryonic organ development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045617 |
negative regulation of keratinocyte differentiation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0044030 |
regulation of DNA methylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0043010 |
camera-type eye development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0042733 |
embryonic digit morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4942413 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070830 |
bicellular tight junction assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051973 |
positive regulation of telomerase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045617 |
negative regulation of keratinocyte differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0044030 |
regulation of DNA methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034329 |
cell junction assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0031490 |
chromatin DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008544 |
epidermis development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008283 |
cell population proliferation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005911 |
cell-cell junction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0003382 |
epithelial cell morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q6ISB3 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 Varma, S et al. (2012) The transcription factors Grainyhead-like 2 and NK2-homeobox 1 form a regulatory loop that coordinates lung epithelial cell morphogenesis and differentiation. J. Biol. Chem. 287 37282-95 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Werth, M et al. (2010) The transcription factor grainyhead-like 2 regulates the molecular composition of the epithelial apical junctional complex. Development 137 3835-45 PubMed GONUTS page
- ↑ Rifat, Y et al. (2010) Regional neural tube closure defined by the Grainy head-like transcription factors. Dev. Biol. 345 237-45 PubMed GONUTS page
- ↑ 4.0 4.1 Boglev, Y et al. (2011) The unique and cooperative roles of the Grainy head-like transcription factors in epidermal development reflect unexpected target gene specificity. Dev. Biol. 349 512-22 PubMed GONUTS page
- ↑ 5.0 5.1 Senga, K et al. (2012) Grainyhead-like 2 regulates epithelial morphogenesis by establishing functional tight junctions through the organization of a molecular network among claudin3, claudin4, and Rab25. Mol. Biol. Cell 23 2845-55 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 6.4 6.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 7.00 7.01 7.02 7.03 7.04 7.05 7.06 7.07 7.08 7.09 7.10 7.11 Pyrgaki, C et al. (2011) Grainyhead-like 2 regulates neural tube closure and adhesion molecule expression during neural fold fusion. Dev. Biol. 353 38-49 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 8.3 8.4 8.5 Wilanowski, T et al. (2002) A highly conserved novel family of mammalian developmental transcription factors related to Drosophila grainyhead. Mech. Dev. 114 37-50 PubMed GONUTS page
- ↑ 9.0 9.1 Walentin, K et al. (2015) A Grhl2-dependent gene network controls trophoblast branching morphogenesis. Development 142 1125-36 PubMed GONUTS page
- ↑ 10.0 10.1 Brouns, MR et al. (2011) Over-expression of Grhl2 causes spina bifida in the Axial defects mutant mouse. Hum. Mol. Genet. 20 1536-46 PubMed GONUTS page
c
- GO:0043010 ! camera-type eye development
- GO:0003208 ! cardiac ventricle morphogenesis
- GO:0005911 ! cell-cell junction
- GO:0007155 ! cell adhesion
- GO:0034329 ! cell junction assembly
- GO:0008283 ! cell population proliferation
- Chordata
- GO:0003682 ! chromatin binding
- GO:0031490 ! chromatin DNA binding
- Craniata
d
e
- GO:0048701 ! embryonic cranial skeleton morphogenesis
- GO:0042733 ! embryonic digit morphogenesis
- GO:0048568 ! embryonic organ development
- GO:0008544 ! epidermis development
- GO:0060672 ! epithelial cell morphogenesis involved in placental branching
- GO:0003382 ! epithelial cell morphogenesis
- GO:0090132 ! epithelium migration
- Euarchontoglires
- Eukaryota
- Euteleostomi
- Eutheria
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