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MOUSE:CLOCK
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Clock | |
Protein Name(s) | Circadian locomoter output cycles protein kaput
mCLOCK | |
External Links | ||
UniProt | O08785 | |
EMBL | AF000998 AF146793 | |
CCDS | CCDS19360.1 | |
RefSeq | NP_001276755.1 NP_031741.1 XP_006534807.1 | |
UniGene | Mm.3552 Mm.392894 | |
PDB | 4F3L | |
PDBsum | 4F3L | |
DisProt | DP00734 | |
ProteinModelPortal | O08785 | |
SMR | O08785 | |
BioGrid | 198756 | |
DIP | DIP-30958N | |
IntAct | O08785 | |
MINT | MINT-4654078 | |
PhosphoSite | O08785 | |
MaxQB | O08785 | |
PaxDb | O08785 | |
PRIDE | O08785 | |
DNASU | 12753 | |
Ensembl | ENSMUST00000075159 | |
GeneID | 12753 | |
KEGG | mmu:12753 | |
UCSC | uc008xuq.1 | |
CTD | 9575 | |
MGI | MGI:99698 | |
eggNOG | NOG300360 | |
GeneTree | ENSGT00760000118788 | |
HOGENOM | HOG000234382 | |
HOVERGEN | HBG050997 | |
InParanoid | O08785 | |
KO | K02223 | |
OMA | TPINMQG | |
OrthoDB | EOG71G9T7 | |
PhylomeDB | O08785 | |
TreeFam | TF324568 | |
Reactome | REACT_115781 REACT_198351 REACT_198352 REACT_198602 REACT_198620 REACT_226917 REACT_241925 REACT_24972 | |
NextBio | 282092 | |
PRO | PR:O08785 | |
Proteomes | UP000000589 | |
Bgee | O08785 | |
CleanEx | MM_CLOCK | |
ExpressionAtlas | O08785 | |
Genevestigator | O08785 | |
GO | GO:0033391 GO:0005694 GO:0005737 GO:0005829 GO:0005654 GO:0005634 GO:0005667 GO:0031490 GO:0001047 GO:0001046 GO:0003677 GO:0070888 GO:0004402 GO:0000978 GO:0000982 GO:0001077 GO:0001190 GO:0043565 GO:0003700 GO:0004871 GO:0008134 GO:0071479 GO:0032922 GO:0007623 GO:0000077 GO:0016573 GO:2000323 GO:0045892 GO:0050729 GO:0051092 GO:0045944 GO:0045893 GO:0043161 GO:0042634 GO:0050796 GO:0006355 GO:2000074 GO:0051775 GO:0007283 GO:0006366 | |
Gene3D | 4.10.280.10 | |
InterPro | IPR011598 IPR001067 IPR001610 IPR000014 IPR013767 | |
Pfam | PF00010 PF00989 | |
PRINTS | PR00785 | |
SMART | SM00353 SM00086 SM00091 | |
SUPFAM | SSF47459 SSF55785 | |
PROSITE | PS50888 PS50112 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
Contributes to |
GO:0016563 |
transcription activator activity |
ECO:0000315 |
F |
Fig 4B to 4D show CLOCK, BMAL1, and the mutant CLOCK delta 19 assayed at transcriptional activation sites in the luciferase reporter derived from the 5' flanking region of the mper1 gene. Transcriptional activator activity is present when only when both CLOCK and BMAL1 are present, and transcriptional activator activity is not present with the mutant CLOCK delta 19. |
complete | ||||
GO:0005634 |
nucleus |
ECO:0000314 |
C |
Fig. 1 SCN extracts obtained from C57BL/6J mice at designated circadian times were fractionated and analyzed by Western blotting using CLOCK antibodies |
complete | |||||
GO:0005737 |
cytoplasm |
ECO:0000314 |
C |
Fig. 1 SCN extracts obtained from C57BL/6J mice at designated circadian times were fractionated and analyzed by Western blotting using CLOCK antibodies |
complete | |||||
GO:0005667 |
transcription factor complex |
ECO:0000316 |
|
C |
Fig 4B to 4D show CLOCK and BMAL1 assayed at transcriptional activation sites in the luciferase reporter derived from the 5' flanking region of the mper1 gene. |
complete | ||||
involved_in |
GO:0042752 |
regulation of circadian rhythm |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0070888 |
E-box binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006473 |
protein acetylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000980 |
RNA polymerase II distal enhancer sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000980 |
RNA polymerase II distal enhancer sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000980 |
RNA polymerase II distal enhancer sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000980 |
RNA polymerase II distal enhancer sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000980 |
RNA polymerase II distal enhancer sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000980 |
RNA polymerase II distal enhancer sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050729 |
positive regulation of inflammatory response |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000980 |
RNA polymerase II distal enhancer sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0070888 |
E-box binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
has_regulation_target:(ENSEMBL:ENSMUSG00000020893) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000305 |
curator inference used in manual assertion |
GO:0045944 |
F |
occurs_at:(SO:0001952) |
Seeded From UniProt |
complete | |
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000323 |
negative regulation of glucocorticoid receptor signaling pathway |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000074 |
regulation of type B pancreatic cell development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0070888 |
E-box binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0070888 |
E-box binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0070888 |
E-box binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051775 |
response to redox state |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051092 |
positive regulation of NF-kappaB transcription factor activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050796 |
regulation of insulin secretion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043161 |
proteasome-mediated ubiquitin-dependent protein catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042634 |
regulation of hair cycle |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0033391 |
chromatoid body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0031490 |
chromatin DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007623 |
circadian rhythm |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007283 |
spermatogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004402 |
histone acetyltransferase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000980 |
RNA polymerase II distal enhancer sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0071479 |
cellular response to ionizing radiation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0070888 |
E-box binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0051775 |
response to redox state |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:1096381 |
P |
has_regulation_target:(MGI:MGI:1098283) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:620271 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043231 |
intracellular membrane-bounded organelle |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0042634 |
regulation of hair cycle |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000247 |
sequence alignment evidence used in manual assertion |
EMBL:AJ318057 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007623 |
circadian rhythm |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1861634 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007623 |
circadian rhythm |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1861634 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007623 |
circadian rhythm |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006473 |
protein acetylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005791 |
rough endoplasmic reticulum |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:620271 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:620271 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005726 |
perichromatin fibrils |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:620271 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005694 |
chromosome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:620271 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004402 |
histone acetyltransferase activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000247 |
sequence alignment evidence used in manual assertion |
EMBL:AJ318057 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0000077 |
DNA damage checkpoint |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016573 |
histone acetylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004402 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016573 |
histone acetylation |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004402 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016573 |
histone acetylation |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004402 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016573 |
histone acetylation |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004402 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016573 |
histone acetylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004402 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071479 |
cellular response to ionizing radiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0070888 |
E-box binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051775 |
response to redox state |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043231 |
intracellular membrane-bounded organelle |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042634 |
regulation of hair cycle |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006473 |
protein acetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005694 |
chromosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004402 |
histone acetyltransferase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000077 |
DNA damage checkpoint |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15516 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005667 |
transcription factor complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046983 |
protein dimerization activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004402 |
histone acetyltransferase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
Reactome:R-NUL-4568946 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-MMU-8878686 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
enables |
GO:0004402 |
histone acetyltransferase activity |
Reactome:R-NUL-4568946 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016746 |
transferase activity, transferring acyl groups |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048511 |
rhythmic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gekakis, N et al. (1998) Role of the CLOCK protein in the mammalian circadian mechanism. Science 280 1564-9 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 Kondratov, RV et al. (2003) BMAL1-dependent circadian oscillation of nuclear CLOCK: posttranslational events induced by dimerization of transcriptional activators of the mammalian clock system. Genes Dev. 17 1921-32 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Nakashima, A et al. (2018) Dec1 and CLOCK Regulate Na/K-ATPase β1 Subunit Expression and Blood Pressure. Hypertension 72 746-754 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 Hamaguchi, H et al. (2004) Expression of the gene for Dec2, a basic helix-loop-helix transcription factor, is regulated by a molecular clock system. Biochem. J. 382 43-50 PubMed GONUTS page
- ↑ Lin, R et al. (2017) CLOCK Acetylates ASS1 to Drive Circadian Rhythm of Ureagenesis. Mol. Cell 68 198-209.e6 PubMed GONUTS page
- ↑ Lande-Diner, L et al. (2013) A positive feedback loop links circadian clock factor CLOCK-BMAL1 to the basic transcriptional machinery. Proc. Natl. Acad. Sci. U.S.A. 110 16021-6 PubMed GONUTS page
- ↑ Miki, T et al. (2013) p53 regulates Period2 expression and the circadian clock. Nat Commun 4 2444 PubMed GONUTS page
- ↑ Katada, S & Sassone-Corsi, P (2010) The histone methyltransferase MLL1 permits the oscillation of circadian gene expression. Nat. Struct. Mol. Biol. 17 1414-21 PubMed GONUTS page
- ↑ Devos, J et al. (2011) Magel2, a Prader-Willi syndrome candidate gene, modulates the activities of circadian rhythm proteins in cultured cells. J Circadian Rhythms 9 12 PubMed GONUTS page
- ↑ Asher, G et al. (2008) SIRT1 regulates circadian clock gene expression through PER2 deacetylation. Cell 134 317-28 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 Ramsey, KM et al. (2009) Circadian clock feedback cycle through NAMPT-mediated NAD+ biosynthesis. Science 324 651-4 PubMed GONUTS page
- ↑ 12.0 12.1 Li, DQ et al. (2013) Metastasis-associated protein 1 is an integral component of the circadian molecular machinery. Nat Commun 4 2545 PubMed GONUTS page
- ↑ 13.0 13.1 Ward, SM et al. (2010) The transcriptional repressor ID2 can interact with the canonical clock components CLOCK and BMAL1 and mediate inhibitory effects on mPer1 expression. J. Biol. Chem. 285 38987-9000 PubMed GONUTS page
- ↑ 14.0 14.1 Bellet, MM et al. (2012) The RelB subunit of NFκB acts as a negative regulator of circadian gene expression. Cell Cycle 11 3304-11 PubMed GONUTS page
- ↑ 15.0 15.1 15.2 Koyanagi, S et al. (2011) cAMP-response element (CRE)-mediated transcription by activating transcription factor-4 (ATF4) is essential for circadian expression of the Period2 gene. J. Biol. Chem. 286 32416-23 PubMed GONUTS page
- ↑ Xu, CX et al. (2010) Disruption of CLOCK-BMAL1 transcriptional activity is responsible for aryl hydrocarbon receptor-mediated regulation of Period1 gene. Toxicol. Sci. 115 98-108 PubMed GONUTS page
- ↑ Li, Y et al. (2004) DNA binding, but not interaction with Bmal1, is responsible for DEC1-mediated transcription regulation of the circadian gene mPer1. Biochem. J. 382 895-904 PubMed GONUTS page
- ↑ 18.0 18.1 18.2 Kawamoto, T et al. (2004) A novel autofeedback loop of Dec1 transcription involved in circadian rhythm regulation. Biochem. Biophys. Res. Commun. 313 117-24 PubMed GONUTS page
- ↑ Sato, F et al. (2004) Functional analysis of the basic helix-loop-helix transcription factor DEC1 in circadian regulation. Interaction with BMAL1. Eur. J. Biochem. 271 4409-19 PubMed GONUTS page
- ↑ 20.0 20.1 Han, DH et al. (2014) Modulation of glucocorticoid receptor induction properties by core circadian clock proteins. Mol. Cell. Endocrinol. 383 170-80 PubMed GONUTS page
- ↑ 21.0 21.1 Marcheva, B et al. (2010) Disruption of the clock components CLOCK and BMAL1 leads to hypoinsulinaemia and diabetes. Nature 466 627-31 PubMed GONUTS page
- ↑ 22.0 22.1 Schoenhard, JA et al. (2003) Regulation of the PAI-1 promoter by circadian clock components: differential activation by BMAL1 and BMAL2. J. Mol. Cell. Cardiol. 35 473-81 PubMed GONUTS page
- ↑ 23.0 23.1 23.2 Doi, R et al. (2010) CLOCK regulates circadian rhythms of hepatic glycogen synthesis through transcriptional activation of Gys2. J. Biol. Chem. 285 22114-21 PubMed GONUTS page
- ↑ 24.0 24.1 Sasaki, M et al. (2009) Preferential inhibition of BMAL2-CLOCK activity by PER2 reemphasizes its negative role and a positive role of BMAL2 in the circadian transcription. J. Biol. Chem. 284 25149-59 PubMed GONUTS page
- ↑ Spengler, ML et al. (2012) Core circadian protein CLOCK is a positive regulator of NF-κB-mediated transcription. Proc. Natl. Acad. Sci. U.S.A. 109 E2457-65 PubMed GONUTS page
- ↑ 26.0 26.1 Bertolucci, C et al. (2008) Evidence for an overlapping role of CLOCK and NPAS2 transcription factors in liver circadian oscillators. Mol. Cell. Biol. 28 3070-5 PubMed GONUTS page
- ↑ Honma, S et al. (2002) Dec1 and Dec2 are regulators of the mammalian molecular clock. Nature 419 841-4 PubMed GONUTS page
- ↑ Goriki, A et al. (2014) A novel protein, CHRONO, functions as a core component of the mammalian circadian clock. PLoS Biol. 12 e1001839 PubMed GONUTS page
- ↑ Ye, R et al. (2011) Biochemical analysis of the canonical model for the mammalian circadian clock. J. Biol. Chem. 286 25891-902 PubMed GONUTS page
- ↑ Li, MD et al. (2013) O-GlcNAc signaling entrains the circadian clock by inhibiting BMAL1/CLOCK ubiquitination. Cell Metab. 17 303-10 PubMed GONUTS page
- ↑ 31.0 31.1 Peruquetti, RL et al. (2012) Circadian proteins CLOCK and BMAL1 in the chromatoid body, a RNA processing granule of male germ cells. PLoS ONE 7 e42695 PubMed GONUTS page
- ↑ Baeza-Raja, B et al. (2013) p75 neurotrophin receptor is a clock gene that regulates oscillatory components of circadian and metabolic networks. J. Neurosci. 33 10221-34 PubMed GONUTS page
- ↑ 33.0 33.1 Nader, N et al. (2009) Circadian rhythm transcription factor CLOCK regulates the transcriptional activity of the glucocorticoid receptor by acetylating its hinge region lysine cluster: potential physiological implications. FASEB J. 23 1572-83 PubMed GONUTS page
- ↑ 34.0 34.1 34.2 34.3 Huang, N et al. (2012) Crystal structure of the heterodimeric CLOCK:BMAL1 transcriptional activator complex. Science 337 189-94 PubMed GONUTS page
- ↑ Richards, J et al. (2014) A role for the circadian clock protein Per1 in the regulation of the NaCl co-transporter (NCC) and the with-no-lysine kinase (WNK) cascade in mouse distal convoluted tubule cells. J. Biol. Chem. 289 11791-806 PubMed GONUTS page
- ↑ Curtis, AM et al. (2004) Histone acetyltransferase-dependent chromatin remodeling and the vascular clock. J. Biol. Chem. 279 7091-7 PubMed GONUTS page
- ↑ Zhao, WN et al. (2007) CIPC is a mammalian circadian clock protein without invertebrate homologues. Nat. Cell Biol. 9 268-75 PubMed GONUTS page
- ↑ Annayev, Y et al. (2014) Gene model 129 (Gm129) encodes a novel transcriptional repressor that modulates circadian gene expression. J. Biol. Chem. 289 5013-24 PubMed GONUTS page
- ↑ 39.0 39.1 Yujnovsky, I et al. (2006) Signaling mediated by the dopamine D2 receptor potentiates circadian regulation by CLOCK:BMAL1. Proc. Natl. Acad. Sci. U.S.A. 103 6386-91 PubMed GONUTS page
- ↑ Duffield, GE et al. (2009) A role for Id2 in regulating photic entrainment of the mammalian circadian system. Curr. Biol. 19 297-304 PubMed GONUTS page
- ↑ 41.0 41.1 Avivi, A et al. (2001) Biological clock in total darkness: the Clock/MOP3 circadian system of the blind subterranean mole rat. Proc. Natl. Acad. Sci. U.S.A. 98 13751-6 PubMed GONUTS page
- ↑ Vitaterna, MH et al. (1994) Mutagenesis and mapping of a mouse gene, Clock, essential for circadian behavior. Science 264 719-25 PubMed GONUTS page
- ↑ 43.0 43.1 43.2 Cheng, MY et al. (2002) Prokineticin 2 transmits the behavioural circadian rhythm of the suprachiasmatic nucleus. Nature 417 405-10 PubMed GONUTS page
c
d
- GO:0000981 ! DNA-binding transcription factor activity, RNA polymerase II-specific
- GO:0001228 ! DNA-binding transcription activator activity, RNA polymerase II-specific
- GO:0003700 ! DNA-binding transcription factor activity
- GO:0003677 ! DNA binding
- GO:0000077 ! DNA damage checkpoint signaling
- GO:0006974 ! DNA damage response
g
n
p
- GO:0005726 ! perichromatin fibrils
- GO:0045893 ! positive regulation of DNA-templated transcription
- GO:0050729 ! positive regulation of inflammatory response
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0051092 ! positive regulation of NF-kappaB transcription factor activity
- GO:0043161 ! proteasome-mediated ubiquitin-dependent protein catabolic process
- GO:0006473 ! protein acetylation
- GO:0046983 ! protein dimerization activity
r
- GO:0042634 ! regulation of hair cycle
- GO:2000074 ! regulation of type B pancreatic cell development
- GO:0042752 ! regulation of circadian rhythm
- GO:0050796 ! regulation of insulin secretion
- GO:0006355 ! regulation of DNA-templated transcription
- GO:0051775 ! response to redox state
- GO:0048511 ! rhythmic process
- GO:0000980 ! RNA polymerase II distal enhancer sequence-specific DNA binding
- GO:0000978 ! RNA polymerase II cis-regulatory region sequence-specific DNA binding
- Rodentia
- GO:0005791 ! rough endoplasmic reticulum
t