GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
MOUSE:CLN8
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Cln8 | |
Protein Name(s) | Protein CLN8 | |
External Links | ||
UniProt | Q9QUK3 | |
EMBL | AF125308 AF125307 BC021625 | |
CCDS | CCDS40239.1 | |
RefSeq | NP_036130.1 XP_006508869.1 XP_006508870.1 | |
UniGene | Mm.254027 | |
MaxQB | Q9QUK3 | |
PaxDb | Q9QUK3 | |
PRIDE | Q9QUK3 | |
Ensembl | ENSMUST00000027554 | |
GeneID | 26889 | |
KEGG | mmu:26889 | |
UCSC | uc009kze.1 | |
CTD | 2055 | |
MGI | MGI:1349447 | |
eggNOG | NOG239251 | |
GeneTree | ENSGT00390000001315 | |
HOGENOM | HOG000111792 | |
HOVERGEN | HBG028338 | |
InParanoid | Q9QUK3 | |
KO | K12360 | |
OMA | LTYHMWW | |
PhylomeDB | Q9QUK3 | |
TreeFam | TF331146 | |
NextBio | 304715 | |
PRO | PR:Q9QUK3 | |
Proteomes | UP000000589 | |
Bgee | Q9QUK3 | |
CleanEx | MM_CLN8 | |
ExpressionAtlas | Q9QUK3 | |
Genevestigator | Q9QUK3 | |
GO | GO:0005783 GO:0005789 GO:0005793 GO:0033116 GO:0016021 GO:0005739 GO:0008344 GO:0007628 GO:0001306 GO:0008306 GO:0044265 GO:0044257 GO:0044267 GO:0006672 GO:0008203 GO:0051935 GO:0007040 GO:0007006 GO:0050881 GO:0043066 GO:0051348 GO:0007399 GO:0060052 GO:0050885 GO:0050884 GO:0006644 GO:0045494 GO:0008361 GO:0060041 GO:0035176 GO:0021523 GO:0021522 GO:0007601 | |
InterPro | IPR006634 | |
Pfam | PF03798 | |
SMART | SM00724 | |
PROSITE | PS50922 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0051179 |
localization |
ECO:0000314 |
P |
Figure 5 shows the co-localization of CLN8 with the VAPA protein. |
complete | |||||
GO:0051179 |
localization |
ECO:0000314 |
P |
Figure 5 shows the co-localization of CLN8 with the GATE16 protein. |
complete | |||||
GO:0045184 |
establishment of protein localization |
ECO:0000314 |
P |
Figure 6. Co-localization of CLN8 and VAPA in the adult mouse CNS tissues. |
complete | |||||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008203 |
cholesterol metabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007399 |
nervous system development |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006672 |
ceramide metabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006644 |
phospholipid metabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005793 |
endoplasmic reticulum-Golgi intermediate compartment |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060052 |
neurofilament cytoskeleton organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0060041 |
retina development in camera-type eye |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060041 |
retina development in camera-type eye |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0051935 |
glutamate reuptake |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
occurs_in:(EMAPA:17577) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0051935 |
glutamate reuptake |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
occurs_in:(EMAPA:17577) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0050885 |
neuromuscular process controlling balance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0050884 |
neuromuscular process controlling posture |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0050881 |
musculoskeletal movement |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0045494 |
photoreceptor cell maintenance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0045494 |
photoreceptor cell maintenance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0044267 |
cellular protein metabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0044265 |
cellular macromolecule catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0044257 |
cellular protein catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0043066 |
negative regulation of apoptotic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0035176 |
social behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0021523 |
somatic motor neuron differentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0021522 |
spinal cord motor neuron differentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0008361 |
regulation of cell size |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0008344 |
adult locomotory behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0008306 |
associative learning |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0008203 |
cholesterol metabolic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0007628 |
adult walking behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007628 |
adult walking behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007628 |
adult walking behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007628 |
adult walking behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007628 |
adult walking behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007628 |
adult walking behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007601 |
visual perception |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
has_participant:(EMAPA:17168) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0007601 |
visual perception |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
has_participant:(EMAPA:17168) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0007601 |
visual perception |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007601 |
visual perception |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
has_participant:(EMAPA:17168) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0007399 |
nervous system development |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0007040 |
lysosome organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0007040 |
lysosome organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
occurs_in:(EMAPA:16894)|occurs_in:(EMAPA:17373)|occurs_in:(EMAPA:16846)|occurs_in:(EMAPA:16105)|occurs_in:(EMAPA:17503) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0007040 |
lysosome organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
occurs_in:(CL:0000057) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0007040 |
lysosome organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0007006 |
mitochondrial membrane organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
occurs_in:(EMAPA:16846) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0006672 |
ceramide metabolic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006644 |
phospholipid metabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0006644 |
phospholipid metabolic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005793 |
endoplasmic reticulum-Golgi intermediate compartment |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0001306 |
age-dependent response to oxidative stress |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1856959 |
P |
has_participant:(EMAPA:17168) |
Seeded From UniProt |
complete | |
part_of |
GO:0005739 |
mitochondrion |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0007006 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0098793 |
presynapse |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0051935 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0098793 |
presynapse |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0051935 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005789 |
endoplasmic reticulum membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0033116 |
endoplasmic reticulum-Golgi intermediate compartment membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Passantino, R et al. (2013) Identifying protein partners of CLN8, an ER-resident protein involved in neuronal ceroid lipofuscinosis. Biochim. Biophys. Acta 1833 529-40 PubMed GONUTS page
- ↑ Lyly, A et al. (2009) Novel interactions of CLN5 support molecular networking between Neuronal Ceroid Lipofuscinosis proteins. BMC Cell Biol. 10 83 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 Callahan, LM et al. (1991) Neurofilament distribution is altered in the Mnd (motor neuron degeneration) mouse. J. Neuropathol. Exp. Neurol. 50 491-504 PubMed GONUTS page
- ↑ 4.0 4.1 Won, J et al. (2011) Mouse model resources for vision research. J Ophthalmol 2011 391384 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 Seigel, GM et al. (2005) Progression of early postnatal retinal pathology in a mouse model of neuronal ceroid lipofuscinosis. Eye (Lond) 19 1306-12 PubMed GONUTS page
- ↑ Mennini, T et al. (1998) Spinal cord GLT-1 glutamate transporter and blood glutamic acid alterations in motor neuron degeneration (Mnd) mice. J. Neurol. Sci. 157 31-6 PubMed GONUTS page
- ↑ Battaglioli, G et al. (1993) Synaptosomal glutamate uptake declines progressively in the spinal cord of a mutant mouse with motor neuron disease. J. Neurochem. 60 1567-9 PubMed GONUTS page
- ↑ 8.0 8.1 Boyce, S et al. (1999) Onset and progression of motor deficits in motor neuron degeneration (mnd) mice are unaltered by the glycine/NMDA receptor antagonist L-701,324 or the MAO-B inhibitor R(-)-deprenyl. Exp. Neurol. 155 49-58 PubMed GONUTS page
- ↑ Bennett, MJ et al. (1997) In-utero and post-delivery supplementation of motor neuron degeneration mutant mice with polyunsaturated fatty acids does not alter the clinical or pathological course. Neuropediatrics 28 82-4 PubMed GONUTS page
- ↑ Mazurkiewicz, JE (1991) Ubiquitin deposits are present in spinal motor neurons in all stages of the disease in the motor neuron degeneration (Mnd) mutant of the mouse. Neurosci. Lett. 128 182-6 PubMed GONUTS page
- ↑ Cho, SK et al. (2005) Characterization of lipid-linked oligosaccharide accumulation in mouse models of Batten disease. Glycobiology 15 637-48 PubMed GONUTS page
- ↑ Mazurkiewicz, JE et al. (1993) Cytoplasmic inclusions in spinal neurons of the motor neuron degeneration (Mnd) mouse. I. Light microscopic analysis. J. Neurol. Sci. 116 59-66 PubMed GONUTS page
- ↑ 13.0 13.1 Bolivar, VJ et al. (2002) The development of behavioral abnormalities in the motor neuron degeneration (mnd) mouse. Brain Res. 937 74-82 PubMed GONUTS page
- ↑ Wendt, KD et al. (2005) Behavioral assessment in mouse models of neuronal ceroid lipofuscinosis using a light-cued T-maze. Behav. Brain Res. 161 175-82 PubMed GONUTS page
- ↑ 15.0 15.1 Bronson, RT et al. (1993) Motor neuron degeneration of mice is a model of neuronal ceroid lipofuscinosis (Batten's disease). Ann. Neurol. 33 381-5 PubMed GONUTS page
- ↑ 16.0 16.1 Messer, A et al. (1995) Genetics of primary and timing effects in the mnd mouse. Am. J. Med. Genet. 57 361-4 PubMed GONUTS page
- ↑ Messer, A & Flaherty, L (1986) Autosomal dominance in a late-onset motor neuron disease in the mouse. J. Neurogenet. 3 345-55 PubMed GONUTS page
- ↑ Mennini, T et al. (1999) Biochemical and pharmacological evidence of a functional role of AMPA receptors in motor neuron dysfunction in mnd mice. Eur. J. Neurosci. 11 1705-10 PubMed GONUTS page
- ↑ Messer, A et al. (1993) Retinal degeneration in motor neuron degeneration (mnd) mutant mice. Exp. Eye Res. 57 637-41 PubMed GONUTS page
- ↑ Chang, B et al. (1994) Retinal degeneration in motor neuron degeneration: a mouse model of ceroid lipofuscinosis. Invest. Ophthalmol. Vis. Sci. 35 1071-6 PubMed GONUTS page
- ↑ Pardo, CA et al. (1994) Accumulation of the adenosine triphosphate synthase subunit C in the mnd mutant mouse. A model for neuronal ceroid lipofuscinosis. Am. J. Pathol. 144 829-35 PubMed GONUTS page
- ↑ Faust, JR et al. (1994) Two related proteolipids and dolichol-linked oligosaccharides accumulate in motor neuron degeneration mice (mnd/mnd), a model for neuronal ceroid lipofuscinosis. J. Biol. Chem. 269 10150-5 PubMed GONUTS page
- ↑ Tanner, A & Dice, JF (1995) Batten disease fibroblasts in culture accumulate mitochondrial ATP synthase subunit 9. Cell Biol. Int. 19 71-5 PubMed GONUTS page
- ↑ Cooper, JD et al. (1999) Apparent loss and hypertrophy of interneurons in a mouse model of neuronal ceroid lipofuscinosis: evidence for partial response to insulin-like growth factor-1 treatment. J. Neurosci. 19 2556-67 PubMed GONUTS page
- ↑ Vance, JE et al. (1997) Abnormalities in mitochondria-associated membranes and phospholipid biosynthetic enzymes in the mnd/mnd mouse model of neuronal ceroid lipofuscinosis. Biochim. Biophys. Acta 1344 286-99 PubMed GONUTS page
- ↑ Porter, JC et al. (1997) The motor neuron degeneration (mnd) gene acts intrinsically in motor neurons and peripheral fibroblasts. Mol. Cell. Neurosci. 9 185-93 PubMed GONUTS page
- ↑ Guarneri, R et al. (2004) Retinal oxidation, apoptosis and age- and sex-differences in the mnd mutant mouse, a model of neuronal ceroid lipofuscinosis. Brain Res. 1014 209-20 PubMed GONUTS page
a
c
e
- GO:0005793 ! endoplasmic reticulum-Golgi intermediate compartment
- GO:0033116 ! endoplasmic reticulum-Golgi intermediate compartment membrane
- GO:0005789 ! endoplasmic reticulum membrane
- GO:0005783 ! endoplasmic reticulum
- GO:0045184 ! establishment of protein localization
- Euarchontoglires
- Eukaryota
- Euteleostomi
- Eutheria
m
n
o
p
s