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MOUSE:CLN8

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Cln8
Protein Name(s) Protein CLN8
External Links
UniProt Q9QUK3
EMBL AF125308
AF125307
BC021625
CCDS CCDS40239.1
RefSeq NP_036130.1
XP_006508869.1
XP_006508870.1
UniGene Mm.254027
MaxQB Q9QUK3
PaxDb Q9QUK3
PRIDE Q9QUK3
Ensembl ENSMUST00000027554
GeneID 26889
KEGG mmu:26889
UCSC uc009kze.1
CTD 2055
MGI MGI:1349447
eggNOG NOG239251
GeneTree ENSGT00390000001315
HOGENOM HOG000111792
HOVERGEN HBG028338
InParanoid Q9QUK3
KO K12360
OMA LTYHMWW
PhylomeDB Q9QUK3
TreeFam TF331146
NextBio 304715
PRO PR:Q9QUK3
Proteomes UP000000589
Bgee Q9QUK3
CleanEx MM_CLN8
ExpressionAtlas Q9QUK3
Genevestigator Q9QUK3
GO GO:0005783
GO:0005789
GO:0005793
GO:0033116
GO:0016021
GO:0005739
GO:0008344
GO:0007628
GO:0001306
GO:0008306
GO:0044265
GO:0044257
GO:0044267
GO:0006672
GO:0008203
GO:0051935
GO:0007040
GO:0007006
GO:0050881
GO:0043066
GO:0051348
GO:0007399
GO:0060052
GO:0050885
GO:0050884
GO:0006644
GO:0045494
GO:0008361
GO:0060041
GO:0035176
GO:0021523
GO:0021522
GO:0007601
InterPro IPR006634
Pfam PF03798
SMART SM00724
PROSITE PS50922

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0051179

localization

PMID:23142642[1]

ECO:0000314

P

Figure 5 shows the co-localization of CLN8 with the VAPA protein.

complete
CACAO 5775

GO:0051179

localization

PMID:23142642[1]

ECO:0000314

P

Figure 5 shows the co-localization of CLN8 with the GATE16 protein.

complete
CACAO 5776

GO:0045184

establishment of protein localization

PMID:23142642[1]

ECO:0000314

P

Figure 6. Co-localization of CLN8 and VAPA in the adult mouse CNS tissues.

complete
CACAO 6821

part_of

GO:0005783

endoplasmic reticulum

PMID:19941651[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0008203

cholesterol metabolic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UBY8

P

Seeded From UniProt

complete

involved_in

GO:0007399

nervous system development

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UBY8

P

Seeded From UniProt

complete

involved_in

GO:0006672

ceramide metabolic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UBY8

P

Seeded From UniProt

complete

involved_in

GO:0006644

phospholipid metabolic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UBY8

P

Seeded From UniProt

complete

part_of

GO:0005793

endoplasmic reticulum-Golgi intermediate compartment

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UBY8

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9UBY8

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060052

neurofilament cytoskeleton organization

PMID:2061715[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

  • occurs_in:(EMAPA:17577)
  • occurs_in:(CL:0000100)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060041

retina development in camera-type eye

PMID:21052544[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060041

retina development in camera-type eye

PMID:15565184[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051935

glutamate reuptake

PMID:9600674[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

occurs_in:(EMAPA:17577)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051935

glutamate reuptake

PMID:8095977[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

occurs_in:(EMAPA:17577)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0050885

neuromuscular process controlling balance

PMID:9918704[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0050884

neuromuscular process controlling posture

PMID:2061715[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0050881

musculoskeletal movement

PMID:2061715[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045494

photoreceptor cell maintenance

PMID:9151333[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045494

photoreceptor cell maintenance

PMID:15565184[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0044267

cellular protein metabolic process

PMID:1658691[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

  • occurs_in:(EMAPA:17577)
  • occurs_in:(CL:0000100)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0044265

cellular macromolecule catabolic process

PMID:15647513[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0044257

cellular protein catabolic process

PMID:8389815[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

  • occurs_in:(EMAPA:17577)
  • occurs_in:(CL:0000100)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043066

negative regulation of apoptotic process

PMID:15565184[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

  • regulates_o_occurs_in:(EMAPA:17168)
  • regulates_o_occurs_in:(CL:0000740)|regulates_o_occurs_in:(EMAPA:17168)
  • regulates_o_occurs_in:(CL:0000604)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0035176

social behavior

PMID:12020865[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0021523

somatic motor neuron differentiation

PMID:21052544[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0021522

spinal cord motor neuron differentiation

PMID:2061715[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

  • occurs_in:(EMAPA:17577)
  • results_in_acquisition_of_features_of:(CL:0000100)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008361

regulation of cell size

PMID:15565184[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

  • regulates_o_occurs_in:(EMAPA:17168)
  • regulates_o_occurs_in:(CL:0000740)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008344

adult locomotory behavior

PMID:12020865[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008306

associative learning

PMID:15885820[14]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008203

cholesterol metabolic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UBY8

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007628

adult walking behavior

PMID:9918704[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007628

adult walking behavior

PMID:7683855[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007628

adult walking behavior

PMID:7668363[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007628

adult walking behavior

PMID:3783318[17]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007628

adult walking behavior

PMID:2061715[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007628

adult walking behavior

PMID:10215924[18]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007601

visual perception

PMID:8282051[19]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

has_participant:(EMAPA:17168)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007601

visual perception

PMID:8125718[20]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

has_participant:(EMAPA:17168)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007601

visual perception

PMID:7683855[15]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007601

visual perception

PMID:7668363[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

has_participant:(EMAPA:17168)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007399

nervous system development

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UBY8

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007040

lysosome organization

PMID:8160780[21]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

  • occurs_in:(EMAPA:35915)
  • occurs_in:(CL:0000117)|occurs_in:(EMAPA:32845)
  • occurs_in:(CL:0000117)|occurs_in:(EMAPA:32767)
  • occurs_in:(CL:0000117)|occurs_in:(EMAPA:17577)
  • occurs_in:(CL:0000117)|occurs_in:(EMAPA:17168)
  • occurs_in:(CL:0000117)|occurs_in:(EMAPA:18234)|occurs_in:(EMAPA:32688)|occurs_in:(EMAPA:16846)|occurs_in:(EMAPA:17373)|occurs_in:(EMAPA:17503)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007040

lysosome organization

PMID:8144516[22]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

occurs_in:(EMAPA:16894)|occurs_in:(EMAPA:17373)|occurs_in:(EMAPA:16846)|occurs_in:(EMAPA:16105)|occurs_in:(EMAPA:17503)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007040

lysosome organization

PMID:7613514[23]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

occurs_in:(CL:0000057)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007040

lysosome organization

PMID:10087069[24]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

  • occurs_in:(EMAPA:32845)
  • occurs_in:(CL:0000099)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007006

mitochondrial membrane organization

PMID:9059519[25]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

occurs_in:(EMAPA:16846)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006672

ceramide metabolic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UBY8

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006644

phospholipid metabolic process

PMID:9245501[26]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

  • occurs_in:(EMAPA:16846)
  • occurs_in:(CL:0000182)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006644

phospholipid metabolic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UBY8

P

Seeded From UniProt

complete

part_of

GO:0005793

endoplasmic reticulum-Golgi intermediate compartment

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UBY8

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UBY8

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001306

age-dependent response to oxidative stress

PMID:15213005[27]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1856959

P

has_participant:(EMAPA:17168)

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0007006

C

Seeded From UniProt

complete

part_of

GO:0098793

presynapse

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0051935

C

Seeded From UniProt

complete

part_of

GO:0098793

presynapse

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0051935

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006634

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0005783

endoplasmic reticulum

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0256
UniProtKB-SubCell:SL-0095

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

part_of

GO:0005789

endoplasmic reticulum membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0097

C

Seeded From UniProt

complete

part_of

GO:0033116

endoplasmic reticulum-Golgi intermediate compartment membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0099

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Passantino, R et al. (2013) Identifying protein partners of CLN8, an ER-resident protein involved in neuronal ceroid lipofuscinosis. Biochim. Biophys. Acta 1833 529-40 PubMed GONUTS page
  2. Lyly, A et al. (2009) Novel interactions of CLN5 support molecular networking between Neuronal Ceroid Lipofuscinosis proteins. BMC Cell Biol. 10 83 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 3.4 Callahan, LM et al. (1991) Neurofilament distribution is altered in the Mnd (motor neuron degeneration) mouse. J. Neuropathol. Exp. Neurol. 50 491-504 PubMed GONUTS page
  4. 4.0 4.1 Won, J et al. (2011) Mouse model resources for vision research. J Ophthalmol 2011 391384 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 Seigel, GM et al. (2005) Progression of early postnatal retinal pathology in a mouse model of neuronal ceroid lipofuscinosis. Eye (Lond) 19 1306-12 PubMed GONUTS page
  6. Mennini, T et al. (1998) Spinal cord GLT-1 glutamate transporter and blood glutamic acid alterations in motor neuron degeneration (Mnd) mice. J. Neurol. Sci. 157 31-6 PubMed GONUTS page
  7. Battaglioli, G et al. (1993) Synaptosomal glutamate uptake declines progressively in the spinal cord of a mutant mouse with motor neuron disease. J. Neurochem. 60 1567-9 PubMed GONUTS page
  8. 8.0 8.1 Boyce, S et al. (1999) Onset and progression of motor deficits in motor neuron degeneration (mnd) mice are unaltered by the glycine/NMDA receptor antagonist L-701,324 or the MAO-B inhibitor R(-)-deprenyl. Exp. Neurol. 155 49-58 PubMed GONUTS page
  9. Bennett, MJ et al. (1997) In-utero and post-delivery supplementation of motor neuron degeneration mutant mice with polyunsaturated fatty acids does not alter the clinical or pathological course. Neuropediatrics 28 82-4 PubMed GONUTS page
  10. Mazurkiewicz, JE (1991) Ubiquitin deposits are present in spinal motor neurons in all stages of the disease in the motor neuron degeneration (Mnd) mutant of the mouse. Neurosci. Lett. 128 182-6 PubMed GONUTS page
  11. Cho, SK et al. (2005) Characterization of lipid-linked oligosaccharide accumulation in mouse models of Batten disease. Glycobiology 15 637-48 PubMed GONUTS page
  12. Mazurkiewicz, JE et al. (1993) Cytoplasmic inclusions in spinal neurons of the motor neuron degeneration (Mnd) mouse. I. Light microscopic analysis. J. Neurol. Sci. 116 59-66 PubMed GONUTS page
  13. 13.0 13.1 Bolivar, VJ et al. (2002) The development of behavioral abnormalities in the motor neuron degeneration (mnd) mouse. Brain Res. 937 74-82 PubMed GONUTS page
  14. Wendt, KD et al. (2005) Behavioral assessment in mouse models of neuronal ceroid lipofuscinosis using a light-cued T-maze. Behav. Brain Res. 161 175-82 PubMed GONUTS page
  15. 15.0 15.1 Bronson, RT et al. (1993) Motor neuron degeneration of mice is a model of neuronal ceroid lipofuscinosis (Batten's disease). Ann. Neurol. 33 381-5 PubMed GONUTS page
  16. 16.0 16.1 Messer, A et al. (1995) Genetics of primary and timing effects in the mnd mouse. Am. J. Med. Genet. 57 361-4 PubMed GONUTS page
  17. Messer, A & Flaherty, L (1986) Autosomal dominance in a late-onset motor neuron disease in the mouse. J. Neurogenet. 3 345-55 PubMed GONUTS page
  18. Mennini, T et al. (1999) Biochemical and pharmacological evidence of a functional role of AMPA receptors in motor neuron dysfunction in mnd mice. Eur. J. Neurosci. 11 1705-10 PubMed GONUTS page
  19. Messer, A et al. (1993) Retinal degeneration in motor neuron degeneration (mnd) mutant mice. Exp. Eye Res. 57 637-41 PubMed GONUTS page
  20. Chang, B et al. (1994) Retinal degeneration in motor neuron degeneration: a mouse model of ceroid lipofuscinosis. Invest. Ophthalmol. Vis. Sci. 35 1071-6 PubMed GONUTS page
  21. Pardo, CA et al. (1994) Accumulation of the adenosine triphosphate synthase subunit C in the mnd mutant mouse. A model for neuronal ceroid lipofuscinosis. Am. J. Pathol. 144 829-35 PubMed GONUTS page
  22. Faust, JR et al. (1994) Two related proteolipids and dolichol-linked oligosaccharides accumulate in motor neuron degeneration mice (mnd/mnd), a model for neuronal ceroid lipofuscinosis. J. Biol. Chem. 269 10150-5 PubMed GONUTS page
  23. Tanner, A & Dice, JF (1995) Batten disease fibroblasts in culture accumulate mitochondrial ATP synthase subunit 9. Cell Biol. Int. 19 71-5 PubMed GONUTS page
  24. Cooper, JD et al. (1999) Apparent loss and hypertrophy of interneurons in a mouse model of neuronal ceroid lipofuscinosis: evidence for partial response to insulin-like growth factor-1 treatment. J. Neurosci. 19 2556-67 PubMed GONUTS page
  25. Vance, JE et al. (1997) Abnormalities in mitochondria-associated membranes and phospholipid biosynthetic enzymes in the mnd/mnd mouse model of neuronal ceroid lipofuscinosis. Biochim. Biophys. Acta 1344 286-99 PubMed GONUTS page
  26. Porter, JC et al. (1997) The motor neuron degeneration (mnd) gene acts intrinsically in motor neurons and peripheral fibroblasts. Mol. Cell. Neurosci. 9 185-93 PubMed GONUTS page
  27. Guarneri, R et al. (2004) Retinal oxidation, apoptosis and age- and sex-differences in the mnd mutant mouse, a model of neuronal ceroid lipofuscinosis. Brain Res. 1014 209-20 PubMed GONUTS page