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MAIZE:B4FRJ1

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Species (Taxon ID) Zea mays (Maize). (4577)
Gene Name(s) No Information Provided.
Protein Name(s) Malate dehydrogenase (ECO:0000256 with RuleBase:RU003405)
External Links
UniProt B4FRJ1
EMBL BT039729
RefSeq NP_001140825.1
UniGene Zm.96542
ProteinModelPortal B4FRJ1
PRIDE B4FRJ1
GeneID 100272900
KEGG zma:100272900
Gramene B4FRJ1
HOGENOM HOG000213792
KO K00026
GO GO:0030060
GO:0044262
GO:0006108
GO:0006099
Gene3D 3.40.50.720
3.90.110.10
InterPro IPR001557
IPR022383
IPR001236
IPR015955
IPR001252
IPR010097
IPR016040
PANTHER PTHR11540
Pfam PF02866
PF00056
PIRSF PIRSF000102
SUPFAM SSF56327
TIGRFAMs TIGR01772
PROSITE PS00068

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009505

plant-type cell wall

PMID:21889053[1]

ECO:0000314

C

Figure 1 shows the Malate Dehydrogenase activity in the cell walls of the maize root.

complete
CACAO 5315

GO:0044459

plasma membrane part

PMID:21889053[1]

ECO:0000314

C

See Figure 2 for Malate Dehydrogenase activity presence in plasma membrane.

complete
CACAO 5321

GO:1901001

negative regulation of response to salt stress

PMID:21889053[1]

ECO:0000314

P

Table 3 shows the inhibitory effects on Malate Dehydrogenase by CuCl2 and ZnCl2 salts with an addition of oxaloacetate.

complete
CACAO 5323

GO:0016615

malate dehydrogenase activity

PMID:21889053[1]

ECO:0000314

F

See Figure 1 for malate oxidation activity.

complete
CACAO 5328

GO:0016615

malate dehydrogenase activity

PMID:21889053[1]

ECO:0000314

F

Figure 1

complete
CACAO 5497

GO:0009505

plant-type cell wall

PMID:21889053[1]

ECO:0000314

C

Figure 3: The authors show the MDH protein is associated with the cell wall of the plant cells.

complete
CACAO 5498

GO:0030060

L-malate dehydrogenase activity

PMID:21889053[1]

ECO:0000314

F

See Figure 1 for L-malate dehydrogenase activity

complete
CACAO 5620

part_of

GO:0005886

plasma membrane

PMID:21889053[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0009505

plant-type cell wall

PMID:21889053[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0016615

malate dehydrogenase activity

PMID:21889053[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0030060

L-malate dehydrogenase activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:97050
PANTHER:PTN000166149
RGD:619719
SGD:S000001568
SGD:S000002236
SGD:S000005486
TAIR:locus:2009605
TAIR:locus:2079177
UniProtKB:C6KT25
UniProtKB:P40926
UniProtKB:Q9LKA3

F

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000745763
TAIR:locus:2009605
UniProtKB:Q9LKA3

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10576
FB:FBgn0262559
PANTHER:PTN000166149
RGD:619719
SGD:S000001568
SGD:S000002236
SGD:S000005486
TAIR:locus:2009605
TAIR:locus:2062240
TAIR:locus:2079177
UniProtKB:C6KT25
UniProtKB:P40926
UniProtKB:Q9LKA3
UniProtKB:Q9ZP05

C

Seeded From UniProt

complete

enables

GO:0003824

catalytic activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR015955

F

Seeded From UniProt

complete

involved_in

GO:0005975

carbohydrate metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR015955

P

Seeded From UniProt

complete

involved_in

GO:0006099

tricarboxylic acid cycle

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010097

P

Seeded From UniProt

complete

involved_in

GO:0006108

malate metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001252

P

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001236

F

Seeded From UniProt

complete

enables

GO:0016615

malate dehydrogenase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001252

F

Seeded From UniProt

complete

enables

GO:0016616

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001557
InterPro:IPR015955
InterPro:IPR022383

F

Seeded From UniProt

complete

involved_in

GO:0019752

carboxylic acid metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001557

P

Seeded From UniProt

complete

enables

GO:0030060

L-malate dehydrogenase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR010097

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001236
InterPro:IPR001252
InterPro:IPR001557
InterPro:IPR015955
InterPro:IPR022383

P

Seeded From UniProt

complete

enables

GO:0030060

L-malate dehydrogenase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:1.1.1.37

F

Seeded From UniProt

complete

involved_in

GO:0006099

tricarboxylic acid cycle

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0816

P

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0560

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0560

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 Hadži-Tašković Šukalović, V et al. (2011) Cell wall-associated malate dehydrogenase activity from maize roots. Plant Sci. 181 465-70 PubMed GONUTS page
  2. 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page