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HUMAN:TYSY
Contents
| Species (Taxon ID) | Homo sapiens (Human). (9606) | |
| Gene Name(s) | TYMS (synonyms: TS) | |
| Protein Name(s) | Thymidylate synthase
TS TSase | |
| External Links | ||
| UniProt | P04818 | |
| EMBL | X02308 D00596 AB077207 AB077208 AB062290 AP001178 CH471113 CH471113 BC002567 BC013919 BC083512 D00517 | |
| CCDS | CCDS11821.1 | |
| PIR | A23047 | |
| RefSeq | NP_001062.1 | |
| UniGene | Hs.369762 | |
| PDB | 1HVY 1HW3 1HW4 1HZW 1I00 1JU6 1JUJ 1YPV 2ONB 2RD8 2RDA 3EAW 3EBU 3ED7 3EDW 3EF9 3EGY 3EHI 3EJL 3GG5 3GH0 3GH2 3H9K 3HB8 3N5E 3N5G 3OB7 4E28 4FGT 4G2O 4G6W 4GD7 4GYH 4H1I 4JEF 4KPW 4O1U 4O1X 4UP1 5HS3 | |
| PDBsum | 1HVY 1HW3 1HW4 1HZW 1I00 1JU6 1JUJ 1YPV 2ONB 2RD8 2RDA 3EAW 3EBU 3ED7 3EDW 3EF9 3EGY 3EHI 3EJL 3GG5 3GH0 3GH2 3H9K 3HB8 3N5E 3N5G 3OB7 4E28 4FGT 4G2O 4G6W 4GD7 4GYH 4H1I 4JEF 4KPW 4O1U 4O1X 4UP1 5HS3 | |
| DisProt | DP00073 | |
| ProteinModelPortal | P04818 | |
| SMR | P04818 | |
| BioGrid | 113149 | |
| IntAct | P04818 | |
| MINT | MINT-2800458 | |
| STRING | 9606.ENSP00000315644 | |
| BindingDB | P04818 | |
| ChEMBL | CHEMBL1952 | |
| DrugBank | DB01101 DB00322 DB00544 DB00441 DB00650 DB00563 DB00642 DB06813 DB00293 DB00432 DB00440 | |
| GuidetoPHARMACOLOGY | 2642 | |
| MoonProt | P04818 | |
| iPTMnet | P04818 | |
| PhosphoSite | P04818 | |
| BioMuta | TYMS | |
| DMDM | 136611 | |
| EPD | P04818 | |
| PaxDb | P04818 | |
| PRIDE | P04818 | |
| TopDownProteomics | P04818-1 | |
| DNASU | 7298 | |
| Ensembl | ENST00000323224 ENST00000323250 ENST00000323274 | |
| GeneID | 7298 | |
| KEGG | hsa:7298 | |
| UCSC | uc010dkb.2 | |
| CTD | 7298 | |
| GeneCards | TYMS | |
| HGNC | HGNC:12441 | |
| HPA | CAB002784 | |
| MalaCards | TYMS | |
| MIM | 188350 | |
| neXtProt | NX_P04818 | |
| Orphanet | 240839 | |
| PharmGKB | PA359 | |
| eggNOG | KOG0673 COG0207 | |
| GeneTree | ENSGT00390000014786 | |
| HOGENOM | HOG000257899 | |
| HOVERGEN | HBG001934 | |
| InParanoid | P04818 | |
| KO | K00560 | |
| OMA | IVYELLW | |
| OrthoDB | EOG725DHX | |
| PhylomeDB | P04818 | |
| TreeFam | TF353027 | |
| BioCyc | MetaCyc:HS11096-MONOMER | |
| BRENDA | 2.1.1.45 | |
| Reactome | R-HSA-113510 R-HSA-500753 R-HSA-69205 | |
| SABIO-RK | P04818 | |
| UniPathway | UPA00575 | |
| ChiTaRS | TYMS | |
| EvolutionaryTrace | P04818 | |
| GeneWiki | Thymidylate_synthase | |
| GenomeRNAi | 7298 | |
| NextBio | 28543 | |
| PRO | PR:P04818 | |
| Proteomes | UP000005640 | |
| Bgee | P04818 | |
| CleanEx | HS_TYMS | |
| ExpressionAtlas | P04818 | |
| Genevisible | P04818 | |
| GO | GO:0005737 GO:0005829 GO:0005743 GO:0005759 GO:0005739 GO:0005730 GO:0005654 GO:0005634 GO:0048037 GO:0008144 GO:0005542 GO:0003729 GO:0000166 GO:0004799 GO:0007568 GO:0051216 GO:0016049 GO:0008283 GO:0007623 GO:0009157 GO:0048589 GO:0071897 GO:0006231 GO:0006235 GO:0046078 GO:0000082 GO:0019088 GO:0060574 GO:0000278 GO:0006139 GO:0055086 GO:0031100 GO:0006206 GO:0046134 GO:0000083 GO:0034097 GO:0042493 GO:0045471 GO:0051593 GO:0051384 GO:0046683 GO:0032570 GO:0009636 GO:0033189 GO:0044281 GO:0035999 GO:0019860 | |
| Gene3D | 3.30.572.10 | |
| HAMAP | MF_00008 | |
| InterPro | IPR023451 IPR000398 IPR020940 | |
| Pfam | PF00303 | |
| PRINTS | PR00108 | |
| SUPFAM | SSF55831 | |
| TIGRFAMs | TIGR03284 | |
| PROSITE | PS00091 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
Contributes to |
GO:0004799 |
thymidylate synthase activity |
other:GO_REF:0000100 |
ECO:0000255 |
|
F |
HHPred results yielded an E-value of 2.1e-88, an identity of 100%, a probability of 100%, and a query coverage of 97.07%. |
complete | ||
|
enables |
GO:0000900 |
translation repressor activity, mRNA regulatory element binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_regulation_target:(UniProtKB:P04818) |
Seeded From UniProt |
complete | ||
|
enables |
GO:1990825 |
sequence-specific mRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_direct_input:(UniProtKB:P04818) |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0017148 |
negative regulation of translation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:P04818) |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004799 |
thymidylate synthase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006231 |
dTMP biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006231 |
dTMP biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004799 |
thymidylate synthase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005542 |
folic acid binding |
ECO:0000305 |
curator inference used in manual assertion |
GO:0004799 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0035999 |
tetrahydrofolate interconversion |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006231 |
dTMP biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0071897 |
DNA biosynthetic process |
ECO:0000305 |
curator inference used in manual assertion |
GO:0004799 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004799 |
thymidylate synthase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0046683 |
response to organophosphorus |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005759 |
mitochondrial matrix |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005743 |
mitochondrial inner membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006231 |
dTMP biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11002 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11002 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002610699 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004799 |
thymidylate synthase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG11002 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0097421 |
liver regeneration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0060574 |
intestinal epithelial cell maturation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0051593 |
response to folic acid |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0051384 |
response to glucocorticoid |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0051216 |
cartilage development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0048589 |
developmental growth |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0048037 |
cofactor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0046653 |
tetrahydrofolate metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0046078 |
dUMP metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0045471 |
response to ethanol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0042493 |
response to drug |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0034097 |
response to cytokine |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0033189 |
response to vitamin A |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0032570 |
response to progesterone |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019860 |
uracil metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019088 |
immortalization of host cell by virus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0014070 |
response to organic cyclic compound |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009636 |
response to toxic substance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008144 |
drug binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007623 |
circadian rhythm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007568 |
aging |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006417 |
regulation of translation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006231 |
dTMP biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006206 |
pyrimidine nucleobase metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005730 |
nucleolus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005542 |
folic acid binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004799 |
thymidylate synthase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003729 |
mRNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P45352 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004799 |
thymidylate synthase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006231 |
dTMP biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004799 |
thymidylate synthase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004799 |
thymidylate synthase activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0015949 |
nucleobase-containing small molecule interconversion |
Reactome:R-HSA-499943 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
Reactome:R-HSA-8962050 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
|
involved_in |
GO:0000083 |
regulation of transcription involved in G1/S transition of mitotic cell cycle |
Reactome:R-HSA-69205 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0032259 |
methylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009165 |
nucleotide biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005743 |
mitochondrial inner membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005759 |
mitochondrial matrix |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006235 |
dTTP biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00575 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Chu, E et al. (1991) Autoregulation of human thymidylate synthase messenger RNA translation by thymidylate synthase. Proc. Natl. Acad. Sci. U.S.A. 88 8977-81 PubMed GONUTS page
- ↑ 2.0 2.1 Phan, J et al. (2001) Structure of human thymidylate synthase suggests advantages of chemotherapy with noncompetitive inhibitors. J. Biol. Chem. 276 14170-7 PubMed GONUTS page
- ↑ 3.0 3.1 Schiffer, CA et al. (1995) Crystal structure of human thymidylate synthase: a structural mechanism for guiding substrates into the active site. Biochemistry 34 16279-87 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 Rahman, L et al. (2004) Thymidylate synthase as an oncogene: a novel role for an essential DNA synthesis enzyme. Cancer Cell 5 341-51 PubMed GONUTS page
- ↑ Gwinn, MR et al. (2005) Differential gene expression in normal human mammary epithelial cells treated with malathion monitored by DNA microarrays. Environ. Health Perspect. 113 1046-51 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 6.4 Anderson, DD et al. (2011) Identification of a de novo thymidylate biosynthesis pathway in mammalian mitochondria. Proc. Natl. Acad. Sci. U.S.A. 108 15163-8 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 7.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
c
d
i
m
- Mammalia
- GO:0016020 ! membrane
- Metazoa
- GO:0032259 ! methylation
- GO:0008168 ! methyltransferase activity
- GO:0005743 ! mitochondrial inner membrane
- GO:0005759 ! mitochondrial matrix
- GO:0005739 ! mitochondrion
- GO:0003729 ! mRNA binding
- GO:0000900 ! mRNA regulatory element binding translation repressor activity
n
o
p
r
- GO:0006417 ! regulation of translation
- GO:0009636 ! response to toxic substance
- GO:0046683 ! response to organophosphorus
- GO:0051593 ! response to folic acid
- GO:0051384 ! response to glucocorticoid
- GO:0045471 ! response to ethanol
- GO:0042493 ! response to drug
- GO:0034097 ! response to cytokine
- GO:0033189 ! response to vitamin A
- GO:0032570 ! response to progesterone
t