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HUMAN:RBP2
Contents
| Species (Taxon ID) | Homo sapiens (Human). (9606) | |
| Gene Name(s) | RANBP2 (synonyms: NUP358) | |
| Protein Name(s) | E3 SUMO-protein ligase RanBP2
358 kDa nucleoporin Nuclear pore complex protein Nup358 Nucleoporin Nup358 Ran-binding protein 2 RanBP2 p270 | |
| External Links | ||
| UniProt | P49792 | |
| EMBL | L41840 D42063 AC010095 AB209483 U19248 | |
| CCDS | CCDS2079.1 | |
| PIR | S58884 | |
| RefSeq | NP_006258.3 | |
| UniGene | Hs.199561 Hs.715056 | |
| PDB | 1RRP 1XKE 1Z5S 3UIN 3UIO 3UIP 4GA0 4I9Y 4L6E 4LQW 5CLL 5CLQ | |
| PDBsum | 1RRP 1XKE 1Z5S 3UIN 3UIO 3UIP 4GA0 4I9Y 4L6E 4LQW 5CLL 5CLQ | |
| ProteinModelPortal | P49792 | |
| SMR | P49792 | |
| BioGrid | 111839 | |
| DIP | DIP-37654N | |
| IntAct | P49792 | |
| MINT | MINT-191403 | |
| STRING | 9606.ENSP00000283195 | |
| TCDB | 1.I.1.1.3 | |
| iPTMnet | P49792 | |
| PhosphoSite | P49792 | |
| SwissPalm | P49792 | |
| BioMuta | RANBP2 | |
| DMDM | 83305554 | |
| OGP | P49792 | |
| EPD | P49792 | |
| MaxQB | P49792 | |
| PaxDb | P49792 | |
| PeptideAtlas | P49792 | |
| PRIDE | P49792 | |
| Ensembl | ENST00000283195 | |
| GeneID | 5903 | |
| KEGG | hsa:5903 | |
| UCSC | uc002tem.4 | |
| CTD | 5903 | |
| GeneCards | RANBP2 | |
| H-InvDB | HIX0002358 | |
| HGNC | HGNC:9848 | |
| HPA | CAB034063 HPA018437 HPA023960 HPA049497 HPA051675 | |
| MalaCards | RANBP2 | |
| MIM | 601181 608033 | |
| neXtProt | NX_P49792 | |
| Orphanet | 263524 88619 178342 | |
| PharmGKB | PA34209 | |
| eggNOG | KOG0864 KOG0865 COG0652 COG5171 | |
| GeneTree | ENSGT00760000119119 | |
| HOGENOM | HOG000089994 | |
| HOVERGEN | HBG092361 | |
| InParanoid | P49792 | |
| KO | K12172 | |
| OMA | PGKQNQT | |
| OrthoDB | EOG7X0VG5 | |
| PhylomeDB | P49792 | |
| TreeFam | TF314797 | |
| Reactome | R-HSA-1169408 R-HSA-165054 R-HSA-168276 R-HSA-168325 R-HSA-170822 R-HSA-180746 R-HSA-180910 R-HSA-2467813 R-HSA-2500257 R-HSA-3108214 R-HSA-3301854 R-HSA-3371453 R-HSA-4570464 R-HSA-4615885 R-HSA-5578749 R-HSA-5663220 R-HSA-6784531 R-HSA-68877 | |
| UniPathway | UPA00886 | |
| ChiTaRS | RANBP2 | |
| EvolutionaryTrace | P49792 | |
| GeneWiki | RANBP2 | |
| GenomeRNAi | 5903 | |
| NextBio | 22964 | |
| PRO | PR:P49792 | |
| Proteomes | UP000005640 | |
| Bgee | P49792 | |
| CleanEx | HS_RANBP2 | |
| ExpressionAtlas | P49792 | |
| Genevisible | P49792 | |
| GO | GO:1990723 GO:0005829 GO:0016020 GO:0005739 GO:0005635 GO:0042405 GO:0031965 GO:0005643 GO:0044614 GO:0044615 GO:0016874 GO:0003755 GO:0008536 GO:0003723 GO:0008270 GO:0005975 GO:0044267 GO:0034605 GO:0019221 GO:0010467 GO:0031047 GO:0015758 GO:0008645 GO:0000278 GO:0007077 GO:0019048 GO:0019054 GO:0051028 GO:0033132 GO:0006607 GO:0043687 GO:0006457 GO:0016925 GO:1900034 GO:0090526 GO:0010827 GO:0001975 GO:0007264 GO:0044281 GO:0055085 GO:0008033 GO:0019058 GO:0016032 GO:0019083 | |
| Gene3D | 1.25.40.10 2.30.29.30 2.40.100.10 | |
| InterPro | IPR029000 IPR020892 IPR002130 IPR022011 IPR011993 IPR000156 IPR013026 IPR011990 IPR019734 IPR001876 | |
| Pfam | PF12185 PF00160 PF00638 PF13181 PF00641 | |
| PRINTS | PR00153 | |
| SMART | SM00160 SM00547 | |
| SUPFAM | SSF48452 SSF50729 SSF50891 SSF90209 | |
| PROSITE | PS00170 PS50072 PS50196 PS50005 PS50293 PS01358 PS50199 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0051642 |
centrosome localization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005643 |
nuclear pore |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005642 |
annulate lamellae |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008536 |
Ran GTPase binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
NOT|enables |
GO:0016018 |
cyclosporin A binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
NOT|enables |
GO:0003755 |
peptidyl-prolyl cis-trans isomerase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006607 |
NLS-bearing protein import into nucleus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0044614 |
nuclear pore cytoplasmic filaments |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0044615 |
nuclear pore nuclear basket |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0042405 |
nuclear inclusion body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031965 |
nuclear membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016925 |
protein sumoylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016925 |
protein sumoylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005643 |
nuclear pore |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008536 |
Ran GTPase binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000566604 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006607 |
NLS-bearing protein import into nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002751291 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:96269 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005643 |
nuclear pore |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1351502 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005643 |
nuclear pore |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1351502 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000566604 |
C |
Seeded From UniProt |
complete | ||
|
contributes_to |
GO:0005096 |
GTPase activator activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000566604 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0019789 |
SUMO transferase activity |
ECO:0000269 |
experimental evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0019789 |
SUMO transferase activity |
ECO:0000269 |
experimental evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0019789 |
SUMO transferase activity |
ECO:0000269 |
experimental evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0019789 |
SUMO transferase activity |
ECO:0000269 |
experimental evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0043547 |
positive regulation of GTPase activity |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0005096 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0043657 |
host cell |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0075733 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:1990723 |
cytoplasmic periphery of the nuclear pore complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:M0R3M4 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0044877 |
protein-containing complex binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:M0R3M4 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0044614 |
nuclear pore cytoplasmic filaments |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:M0R3M4 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005643 |
nuclear pore |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:M0R3M4 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0001975 |
response to amphetamine |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:M0R3M4 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0033133 |
positive regulation of glucokinase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9ERU9 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006111 |
regulation of gluconeogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9ERU9 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005739 |
mitochondrion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9ERU9 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000413 |
protein peptidyl-prolyl isomerization |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006457 |
protein folding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
| GO:0005635 |
nuclear envelope |
ECO:0000314 |
C |
Figure 2B shows immunostaining of RanBP2 in the nuclear envelope. |
complete | |||||
|
involved_in |
GO:0046907 |
intracellular transport |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:1900034 |
regulation of cellular response to heat |
Reactome:R-HSA-3371453 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0075733 |
intracellular transport of virus |
Reactome:R-HSA-1176059 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0060964 |
regulation of gene silencing by miRNA |
Reactome:R-HSA-5578749 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0019083 |
viral transcription |
Reactome:R-HSA-168325 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016925 |
protein sumoylation |
Reactome:R-HSA-4655355 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0016032 |
viral process |
Reactome:R-HSA-162599 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006409 |
tRNA export from nucleus |
Reactome:R-HSA-6783483 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006406 |
mRNA export from nucleus |
Reactome:R-HSA-75098 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
P |
Seeded From UniProt |
complete | |
|
involved_in |
GO:0006110 |
regulation of glycolytic process |
Reactome:R-HSA-170822 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
Reactome:R-HSA-75098 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
|
part_of |
GO:0005635 |
nuclear envelope |
Reactome:R-HSA-4655355 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0015031 |
protein transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051028 |
mRNA transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005643 |
nuclear pore |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0031965 |
nuclear membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016925 |
protein sumoylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00886 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Splinter, D et al. (2010) Bicaudal D2, dynein, and kinesin-1 associate with nuclear pore complexes and regulate centrosome and nuclear positioning during mitotic entry. PLoS Biol. 8 e1000350 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Yokoyama, N et al. (1995) A giant nucleopore protein that binds Ran/TC4. Nature 376 184-8 PubMed GONUTS page
- ↑ Ghosh, D et al. (2010) Defining the membrane proteome of NK cells. J Mass Spectrom 45 1-25 PubMed GONUTS page
- ↑ 4.0 4.1 Davis, TL et al. (2010) Structural and biochemical characterization of the human cyclophilin family of peptidyl-prolyl isomerases. PLoS Biol. 8 e1000439 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Frosst, P et al. (2002) Tpr is localized within the nuclear basket of the pore complex and has a role in nuclear protein export. J. Cell Biol. 156 617-30 PubMed GONUTS page
- ↑ Hamard, PJ et al. (2007) Sumoylation delays the ATF7 transcription factor subcellular localization and inhibits its transcriptional activity. Nucleic Acids Res. 35 1134-44 PubMed GONUTS page
- ↑ Satow, R et al. (2012) β-catenin inhibits promyelocytic leukemia protein tumor suppressor function in colorectal cancer cells. Gastroenterology 142 572-81 PubMed GONUTS page
- ↑ Rasala, BA et al. (2006) ELYS is a dual nucleoporin/kinetochore protein required for nuclear pore assembly and proper cell division. Proc. Natl. Acad. Sci. U.S.A. 103 17801-6 PubMed GONUTS page
- ↑ 9.0 9.1 9.2 9.3 9.4 9.5 9.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Saitoh, N et al. (2006) In situ SUMOylation analysis reveals a modulatory role of RanBP2 in the nuclear rim and PML bodies. Exp. Cell Res. 312 1418-30 PubMed GONUTS page
- ↑ Tatham, MH et al. (2005) Unique binding interactions among Ubc9, SUMO and RanBP2 reveal a mechanism for SUMO paralog selection. Nat. Struct. Mol. Biol. 12 67-74 PubMed GONUTS page
- ↑ Pichler, A et al. (2004) The RanBP2 SUMO E3 ligase is neither HECT- nor RING-type. Nat. Struct. Mol. Biol. 11 984-91 PubMed GONUTS page
- ↑ Pichler, A et al. (2002) The nucleoporin RanBP2 has SUMO1 E3 ligase activity. Cell 108 109-20 PubMed GONUTS page
- ↑ Kazyken, D et al. (2014) The nuclear import of ribosomal proteins is regulated by mTOR. Oncotarget 5 9577-93 PubMed GONUTS page
c
m
n
p
- GO:0003755 ! peptidyl-prolyl cis-trans isomerase activity
- GO:0043547 ! positive regulation of GTPase activity
- Primates
- GO:0044877 ! protein-containing complex binding
- GO:0006457 ! protein folding
- GO:0000413 ! protein peptidyl-prolyl isomerization
- GO:0016925 ! protein sumoylation
- GO:0015031 ! protein transport
r