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HUMAN:RBP2

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) RANBP2 (synonyms: NUP358)
Protein Name(s) E3 SUMO-protein ligase RanBP2

358 kDa nucleoporin Nuclear pore complex protein Nup358 Nucleoporin Nup358 Ran-binding protein 2 RanBP2 p270

External Links
UniProt P49792
EMBL L41840
D42063
AC010095
AB209483
U19248
CCDS CCDS2079.1
PIR S58884
RefSeq NP_006258.3
UniGene Hs.199561
Hs.715056
PDB 1RRP
1XKE
1Z5S
3UIN
3UIO
3UIP
4GA0
4I9Y
4L6E
4LQW
5CLL
5CLQ
PDBsum 1RRP
1XKE
1Z5S
3UIN
3UIO
3UIP
4GA0
4I9Y
4L6E
4LQW
5CLL
5CLQ
ProteinModelPortal P49792
SMR P49792
BioGrid 111839
DIP DIP-37654N
IntAct P49792
MINT MINT-191403
STRING 9606.ENSP00000283195
TCDB 1.I.1.1.3
iPTMnet P49792
PhosphoSite P49792
SwissPalm P49792
BioMuta RANBP2
DMDM 83305554
OGP P49792
EPD P49792
MaxQB P49792
PaxDb P49792
PeptideAtlas P49792
PRIDE P49792
Ensembl ENST00000283195
GeneID 5903
KEGG hsa:5903
UCSC uc002tem.4
CTD 5903
GeneCards RANBP2
H-InvDB HIX0002358
HGNC HGNC:9848
HPA CAB034063
HPA018437
HPA023960
HPA049497
HPA051675
MalaCards RANBP2
MIM 601181
608033
neXtProt NX_P49792
Orphanet 263524
88619
178342
PharmGKB PA34209
eggNOG KOG0864
KOG0865
COG0652
COG5171
GeneTree ENSGT00760000119119
HOGENOM HOG000089994
HOVERGEN HBG092361
InParanoid P49792
KO K12172
OMA PGKQNQT
OrthoDB EOG7X0VG5
PhylomeDB P49792
TreeFam TF314797
Reactome R-HSA-1169408
R-HSA-165054
R-HSA-168276
R-HSA-168325
R-HSA-170822
R-HSA-180746
R-HSA-180910
R-HSA-2467813
R-HSA-2500257
R-HSA-3108214
R-HSA-3301854
R-HSA-3371453
R-HSA-4570464
R-HSA-4615885
R-HSA-5578749
R-HSA-5663220
R-HSA-6784531
R-HSA-68877
UniPathway UPA00886
ChiTaRS RANBP2
EvolutionaryTrace P49792
GeneWiki RANBP2
GenomeRNAi 5903
NextBio 22964
PRO PR:P49792
Proteomes UP000005640
Bgee P49792
CleanEx HS_RANBP2
ExpressionAtlas P49792
Genevisible P49792
GO GO:1990723
GO:0005829
GO:0016020
GO:0005739
GO:0005635
GO:0042405
GO:0031965
GO:0005643
GO:0044614
GO:0044615
GO:0016874
GO:0003755
GO:0008536
GO:0003723
GO:0008270
GO:0005975
GO:0044267
GO:0034605
GO:0019221
GO:0010467
GO:0031047
GO:0015758
GO:0008645
GO:0000278
GO:0007077
GO:0019048
GO:0019054
GO:0051028
GO:0033132
GO:0006607
GO:0043687
GO:0006457
GO:0016925
GO:1900034
GO:0090526
GO:0010827
GO:0001975
GO:0007264
GO:0044281
GO:0055085
GO:0008033
GO:0019058
GO:0016032
GO:0019083
Gene3D 1.25.40.10
2.30.29.30
2.40.100.10
InterPro IPR029000
IPR020892
IPR002130
IPR022011
IPR011993
IPR000156
IPR013026
IPR011990
IPR019734
IPR001876
Pfam PF12185
PF00160
PF00638
PF13181
PF00641
PRINTS PR00153
SMART SM00160
SM00547
SUPFAM SSF48452
SSF50729
SSF50891
SSF90209
PROSITE PS00170
PS50072
PS50196
PS50005
PS50293
PS01358
PS50199

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0051642

centrosome localization

PMID:20386726[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005643

nuclear pore

PMID:20386726[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005642

annulate lamellae

PMID:20386726[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005635

nuclear envelope

PMID:20386726[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0008536

Ran GTPase binding

PMID:7603572[2]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P62826

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:19946888[3]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

NOT|enables

GO:0016018

cyclosporin A binding

PMID:20676357[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

NOT|enables

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

PMID:20676357[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0006607

NLS-bearing protein import into nucleus

PMID:7603572[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0044614

nuclear pore cytoplasmic filaments

PMID:7603572[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0044615

nuclear pore nuclear basket

PMID:11839768[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0042405

nuclear inclusion body

PMID:11839768[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0031965

nuclear membrane

PMID:11839768[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0016925

protein sumoylation

PMID:17264123[6]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0016925

protein sumoylation

PMID:22155184[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005643

nuclear pore

PMID:17098863[8]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0008536

Ran GTPase binding

PMID:21873635[9]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000566604
SGD:S000002409
SGD:S000004327
UniProtKB:P49792
UniProtKB:Q9H6Z4

F

Seeded From UniProt

complete

involved_in

GO:0006607

NLS-bearing protein import into nucleus

PMID:21873635[9]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002751291
UniProtKB:P49792

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[9]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:96269
PANTHER:PTN000566604
RGD:1310521
SGD:S000002409
UniProtKB:P43487

C

Seeded From UniProt

complete

part_of

GO:0005643

nuclear pore

PMID:21873635[9]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1351502
PANTHER:PTN000566604
PomBase:SPCC18B5.07c
RGD:1560047
RGD:3191
UniProtKB:P49792
WB:WBGene00003795

C

Seeded From UniProt

complete

part_of

GO:0005643

nuclear pore

PMID:21873635[9]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1351502
PANTHER:PTN000566604
PomBase:SPCC18B5.07c
RGD:1560047
RGD:3191
SGD:S000001325
UniProtKB:P49792
WB:WBGene00003795

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[9]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000566604
PomBase:SPBC365.13c
RGD:1310521
SGD:S000001325
SGD:S000002409
TAIR:locus:2018204
UniProtKB:Q9H6Z4

C

Seeded From UniProt

complete

contributes_to

GO:0005096

GTPase activator activity

PMID:21873635[9]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000566604
PomBase:SPBC1773.07c

F

Seeded From UniProt

complete

enables

GO:0019789

SUMO transferase activity

PMID:16688858[10]

ECO:0000269

experimental evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0019789

SUMO transferase activity

PMID:15608651[11]

ECO:0000269

experimental evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0019789

SUMO transferase activity

PMID:15378033[12]

ECO:0000269

experimental evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0019789

SUMO transferase activity

PMID:11792325[13]

ECO:0000269

experimental evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0043547

positive regulation of GTPase activity

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0005096

P

Seeded From UniProt

complete

part_of

GO:0043657

host cell

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0075733

C

Seeded From UniProt

complete

part_of

GO:1990723

cytoplasmic periphery of the nuclear pore complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:M0R3M4
ensembl:ENSRNOP00000063941

C

Seeded From UniProt

complete

enables

GO:0044877

protein-containing complex binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:M0R3M4
ensembl:ENSRNOP00000063941

F

Seeded From UniProt

complete

part_of

GO:0044614

nuclear pore cytoplasmic filaments

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:M0R3M4
ensembl:ENSRNOP00000063941

C

Seeded From UniProt

complete

part_of

GO:0005643

nuclear pore

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:M0R3M4
ensembl:ENSRNOP00000063941

C

Seeded From UniProt

complete

involved_in

GO:0001975

response to amphetamine

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:M0R3M4
ensembl:ENSRNOP00000063941

P

Seeded From UniProt

complete

involved_in

GO:0033133

positive regulation of glucokinase activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ERU9
ensembl:ENSMUSP00000003310

P

Seeded From UniProt

complete

involved_in

GO:0006111

regulation of gluconeogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ERU9
ensembl:ENSMUSP00000003310

P

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q9ERU9
ensembl:ENSMUSP00000003310

C

Seeded From UniProt

complete

involved_in

GO:0000413

protein peptidyl-prolyl isomerization

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002130

P

Seeded From UniProt

complete

involved_in

GO:0006457

protein folding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020892

P

Seeded From UniProt

complete

GO:0005635

nuclear envelope

PMID:25294810[14]

ECO:0000314

C

Figure 2B shows immunostaining of RanBP2 in the nuclear envelope.

complete
CACAO 11505

involved_in

GO:0046907

intracellular transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000156

P

Seeded From UniProt

complete

involved_in

GO:1900034

regulation of cellular response to heat

Reactome:R-HSA-3371453

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0075733

intracellular transport of virus

Reactome:R-HSA-1176059

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060964

regulation of gene silencing by miRNA

Reactome:R-HSA-5578749

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0019083

viral transcription

Reactome:R-HSA-168325

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0016925

protein sumoylation

Reactome:R-HSA-4655355

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0016032

viral process

Reactome:R-HSA-162599

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006409

tRNA export from nucleus

Reactome:R-HSA-6783483

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006406

mRNA export from nucleus

Reactome:R-HSA-75098
Reactome:R-HSA-75097
Reactome:R-HSA-75096

ECO:0000304

author statement supported by traceable reference used in manual assertion



P

Seeded From UniProt

complete

involved_in

GO:0006110

regulation of glycolytic process

Reactome:R-HSA-170822

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

Reactome:R-HSA-75098
Reactome:R-HSA-75097
Reactome:R-HSA-75096
Reactome:R-HSA-6783483
Reactome:R-HSA-5666169
Reactome:R-HSA-5666160
Reactome:R-HSA-5666129
Reactome:R-HSA-5578744
Reactome:R-HSA-5252041
Reactome:R-HSA-5228523
Reactome:R-HSA-5228508
Reactome:R-HSA-4615987
Reactome:R-HSA-4615872
Reactome:R-HSA-4570493
Reactome:R-HSA-4551679
Reactome:R-HSA-4551649
Reactome:R-HSA-375302
Reactome:R-HSA-3000411
Reactome:R-HSA-3000399
Reactome:R-HSA-3000348
Reactome:R-HSA-2990882
Reactome:R-HSA-2990880
Reactome:R-HSA-2484822
Reactome:R-HSA-2468287
Reactome:R-HSA-2467811
Reactome:R-HSA-2467809
Reactome:R-HSA-192925
Reactome:R-HSA-192627
Reactome:R-HSA-180622
Reactome:R-HSA-170796
Reactome:R-HSA-165047
Reactome:R-HSA-165043
Reactome:R-HSA-1638821
Reactome:R-HSA-1638803
Reactome:R-HSA-141439
Reactome:R-HSA-141431
Reactome:R-HSA-141422
Reactome:R-HSA-141409
Reactome:R-HSA-1176059

ECO:0000304

author statement supported by traceable reference used in manual assertion







































C

Seeded From UniProt

complete

part_of

GO:0005635

nuclear envelope

Reactome:R-HSA-4655355
Reactome:R-HSA-4551679
Reactome:R-HSA-4551649

ECO:0000304

author statement supported by traceable reference used in manual assertion



C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0015031

protein transport

GO_REF:0000037
GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0653
UniProtKB-KW:KW-0811

P

Seeded From UniProt

complete

involved_in

GO:0051028

mRNA transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0509

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

part_of

GO:0005643

nuclear pore

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0906
UniProtKB-SubCell:SL-0185

C

Seeded From UniProt

complete

part_of

GO:0005635

nuclear envelope

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0178

C

Seeded From UniProt

complete

part_of

GO:0031965

nuclear membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0182

C

Seeded From UniProt

complete

involved_in

GO:0016925

protein sumoylation

GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniPathway:UPA00886

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Splinter, D et al. (2010) Bicaudal D2, dynein, and kinesin-1 associate with nuclear pore complexes and regulate centrosome and nuclear positioning during mitotic entry. PLoS Biol. 8 e1000350 PubMed GONUTS page
  2. 2.0 2.1 2.2 Yokoyama, N et al. (1995) A giant nucleopore protein that binds Ran/TC4. Nature 376 184-8 PubMed GONUTS page
  3. Ghosh, D et al. (2010) Defining the membrane proteome of NK cells. J Mass Spectrom 45 1-25 PubMed GONUTS page
  4. 4.0 4.1 Davis, TL et al. (2010) Structural and biochemical characterization of the human cyclophilin family of peptidyl-prolyl isomerases. PLoS Biol. 8 e1000439 PubMed GONUTS page
  5. 5.0 5.1 5.2 Frosst, P et al. (2002) Tpr is localized within the nuclear basket of the pore complex and has a role in nuclear protein export. J. Cell Biol. 156 617-30 PubMed GONUTS page
  6. Hamard, PJ et al. (2007) Sumoylation delays the ATF7 transcription factor subcellular localization and inhibits its transcriptional activity. Nucleic Acids Res. 35 1134-44 PubMed GONUTS page
  7. Satow, R et al. (2012) β-catenin inhibits promyelocytic leukemia protein tumor suppressor function in colorectal cancer cells. Gastroenterology 142 572-81 PubMed GONUTS page
  8. Rasala, BA et al. (2006) ELYS is a dual nucleoporin/kinetochore protein required for nuclear pore assembly and proper cell division. Proc. Natl. Acad. Sci. U.S.A. 103 17801-6 PubMed GONUTS page
  9. 9.0 9.1 9.2 9.3 9.4 9.5 9.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  10. Saitoh, N et al. (2006) In situ SUMOylation analysis reveals a modulatory role of RanBP2 in the nuclear rim and PML bodies. Exp. Cell Res. 312 1418-30 PubMed GONUTS page
  11. Tatham, MH et al. (2005) Unique binding interactions among Ubc9, SUMO and RanBP2 reveal a mechanism for SUMO paralog selection. Nat. Struct. Mol. Biol. 12 67-74 PubMed GONUTS page
  12. Pichler, A et al. (2004) The RanBP2 SUMO E3 ligase is neither HECT- nor RING-type. Nat. Struct. Mol. Biol. 11 984-91 PubMed GONUTS page
  13. Pichler, A et al. (2002) The nucleoporin RanBP2 has SUMO1 E3 ligase activity. Cell 108 109-20 PubMed GONUTS page
  14. Kazyken, D et al. (2014) The nuclear import of ribosomal proteins is regulated by mTOR. Oncotarget 5 9577-93 PubMed GONUTS page