GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
HUMAN:RAD52
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | RAD52 | |
Protein Name(s) | DNA repair protein RAD52 homolog | |
External Links | ||
UniProt | P43351 | |
EMBL | U12134 L33262 U27516 AF125948 AF125949 AF125950 AK292160 AK312026 AY527412 AC004803 CH471116 CH471116 CH471116 CH471116 | |
CCDS | CCDS8507.2 | |
PIR | A57518 | |
RefSeq | NP_001284348.1 NP_001284349.1 NP_602296.2 XP_005253777.1 XP_005253778.1 XP_005253784.1 | |
UniGene | Hs.410355 | |
PDB | 1H2I 1KN0 | |
PDBsum | 1H2I 1KN0 | |
DisProt | DP00437 | |
ProteinModelPortal | P43351 | |
SMR | P43351 | |
BioGrid | 111830 | |
DIP | DIP-333N | |
IntAct | P43351 | |
MINT | MINT-2803258 | |
STRING | 9606.ENSP00000351284 | |
ChEMBL | CHEMBL2362978 | |
PhosphoSite | P43351 | |
DMDM | 1172823 | |
MaxQB | P43351 | |
PaxDb | P43351 | |
PRIDE | P43351 | |
DNASU | 5893 | |
Ensembl | ENST00000358495 ENST00000430095 ENST00000461568 ENST00000468231 ENST00000541619 ENST00000544742 ENST00000545564 | |
GeneID | 5893 | |
KEGG | hsa:5893 | |
UCSC | uc001qis.1 uc001qix.1 | |
CTD | 5893 | |
GeneCards | GC12M001021 | |
HGNC | HGNC:9824 | |
MIM | 600392 | |
neXtProt | NX_P43351 | |
PharmGKB | PA34180 | |
eggNOG | COG5055 | |
GeneTree | ENSGT00390000008766 | |
HOGENOM | HOG000237354 | |
HOVERGEN | HBG054676 | |
InParanoid | P43351 | |
KO | K10873 | |
OMA | QARYSSC | |
OrthoDB | EOG74XS87 | |
PhylomeDB | P43351 | |
TreeFam | TF101221 | |
Reactome | REACT_2141 REACT_408 | |
ChiTaRS | RAD52 | |
EvolutionaryTrace | P43351 | |
GeneWiki | RAD52 | |
GenomeRNAi | 5893 | |
NextBio | 22926 | |
PRO | PR:P43351 | |
Proteomes | UP000005640 | |
Bgee | P43351 | |
CleanEx | HS_RAD52 | |
ExpressionAtlas | P43351 | |
Genevestigator | P43351 | |
GO | GO:0005654 GO:0005634 GO:0003677 GO:0042802 GO:0000730 GO:0006310 GO:0006281 GO:0006302 GO:0000724 | |
InterPro | IPR004585 IPR007232 | |
PANTHER | PTHR12132 | |
Pfam | PF04098 | |
TIGRFAMs | TIGR00607 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0051260 |
protein homooligomerization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0032993 |
protein-DNA complex |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045002 |
double-strand break repair via single-strand annealing |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000951175 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006312 |
mitotic recombination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000951175 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000951175 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:101949 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000819 |
regulation of nucleotide-excision repair |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034599 |
cellular response to oxidative stress |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010792 |
DNA double-strand break processing involved in repair via single-strand annealing |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034599 |
cellular response to oxidative stress |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P43352 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010792 |
DNA double-strand break processing involved in repair via single-strand annealing |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P43352 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P43352 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000724 |
double-strand break repair via homologous recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000730 |
DNA recombinase assembly |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045002 |
double-strand break repair via single-strand annealing |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006302 |
double-strand break repair |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-HSA-75998 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Singleton, MR et al. (2002) Structure of the single-strand annealing domain of human RAD52 protein. Proc. Natl. Acad. Sci. U.S.A. 99 13492-7 PubMed GONUTS page
- ↑ Park, MS et al. (1996) Physical interaction between human RAD52 and RPA is required for homologous recombination in mammalian cells. J. Biol. Chem. 271 18996-9000 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 4.6 de Souza-Pinto, NC et al. (2009) The recombination protein RAD52 cooperates with the excision repair protein OGG1 for the repair of oxidative lesions in mammalian cells. Mol. Cell. Biol. 29 4441-54 PubMed GONUTS page
- ↑ Honda, M et al. (2011) Tyrosine phosphorylation enhances RAD52-mediated annealing by modulating its DNA binding. EMBO J. 30 3368-82 PubMed GONUTS page
- ↑ Baynton, K et al. (2003) WRN interacts physically and functionally with the recombination mediator protein RAD52. J. Biol. Chem. 278 36476-86 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 Shen, Z et al. (1995) The human and mouse homologs of the yeast RAD52 gene: cDNA cloning, sequence analysis, assignment to human chromosome 12p12.2-p13, and mRNA expression in mouse tissues. Genomics 25 199-206 PubMed GONUTS page
d
- GO:0003677 ! DNA binding
- GO:0006974 ! DNA damage response
- GO:0010792 ! DNA double-strand break processing involved in repair via single-strand annealing
- GO:0006310 ! DNA recombination
- GO:0000730 ! DNA recombinase assembly
- GO:0006281 ! DNA repair
- GO:0006302 ! double-strand break repair
- GO:0000724 ! double-strand break repair via homologous recombination
- GO:0045002 ! double-strand break repair via single-strand annealing
p