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HUMAN:D103A

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) DEFB103B (synonyms: BD3, DEFB103, DEFB3)
Protein Name(s) Beta-defensin 103

Beta-defensin 3 BD-3 DEFB-3 HBD3 hBD-3 Defensin, beta 103 Defensin-like protein

External Links
UniProt P81534
EMBL AJ237673
AF295370
AF217245
AB037972
AF301470
AF516673
CCDS CCDS34810.1
CCDS43701.1
RefSeq NP_001075020.1
NP_061131.1
XP_016885681.1
UniGene Hs.283082
Hs.637221
PDB 1KJ6
PDBsum 1KJ6
ProteinModelPortal P81534
SMR P81534
BioGrid 120984
IntAct P81534
STRING 9606.ENSP00000324633
TCDB 1.C.85.1.3
BioMuta DEFB103A
DMDM 17372441
PaxDb P81534
PRIDE P81534
DNASU 414325
55894
Ensembl ENST00000314357
ENST00000318124
ENST00000613448
GeneID 414325
55894
KEGG hsa:414325
hsa:55894
UCSC uc003wrf.4
CTD 414325
55894
DisGeNET 414325
55894
GeneCards DEFB103A
DEFB103B
HGNC HGNC:15967
HGNC:31702
MIM 606611
neXtProt NX_P81534
OpenTargets ENSG00000176797
PharmGKB PA134933952
eggNOG ENOG410JFYR
ENOG411134U
GeneTree ENSGT00530000064280
HOGENOM HOG000015465
HOVERGEN HBG004834
InParanoid P81534
OMA IRGGRCA
OrthoDB EOG093719AW
PhylomeDB P81534
Reactome [www.reactome.org/content/detail/R-HSA-1461957 R-HSA-1461957]
[www.reactome.org/content/detail/R-HSA-1461973 R-HSA-1461973]
EvolutionaryTrace P81534
GeneWiki DEFB103A
PRO PR:P81534
Proteomes UP000005640
Bgee ENSG00000176797
CleanEx HS_DEFB103A
HS_DEFB103B
Genevisible P81534
GO GO:0005576
GO:0005615
GO:0005796
GO:0019730
GO:0042742
GO:0006965
InterPro IPR001855
Pfam PF00711

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0042742

defense response to bacterium

PMID:16436752[1]

ECO:0000314

P

The bactericidal activity of hBD-3, an abbreviation of human beta-defensin 3 which is an alternative name for human beta-defensin 103, against various clinical isolates was evaluated by a liquid microdilution assay as shown in Figure 1. The results showed that hBD-3 used at a concentration of 4 μg/ml was bactericidal against A. baumannii (strain 3) after 3 min of incubation. hBD-3 used at a concentration of 8 μg/ml caused a bactericidal effect within 20 min of incubation against S. aureus (strain 3), E. faecium (strain 3), and P. aeruginosa (strain 3) and within 1 min against S. maltophilia (strain 4) and A. baumannii. At a concentration of 16 μg/ml, the peptide produced a bactericidal effect against S. aureus, E. faecium, P. aeruginosa, and S. maltophilia within 10, 20, 5, and 1 min, respectively.

complete
CACAO 12386

GO:0051873

killing by host of symbiont cells

PMID:16436752[1]

ECO:0000314

P

Human Beta-defensin 103, also known as human beta-defensin 3 (hBD-3), has the ability to kill cells of other organisms. The bactericidal activity of hBD-3 against various clinical isolates was evaluated by a liquid microdilution assay as shown in Figure 1. The results of that assay showed that hBD-3 used at a concentration of 4 μg/ml was bactericidal against A. baumannii (strain 3) after 3 min of incubation. hBD-3 used at a concentration of 8 μg/ml caused a bactericidal effect within 20 min of incubation against S. aureus (strain 3), E. faecium (strain 3), and P. aeruginosa (strain 3) and within 1 min against S. maltophilia (strain 4) and A. baumannii. At a concentration of 16 μg/ml, the peptide produced a bactericidal effect against S. aureus, E. faecium, P. aeruginosa, and S. maltophilia within 10, 20, 5, and 1 min, respectively.

complete
CACAO 12520

GO:0002376

immune system process

PMID:16436752[1]

ECO:0000314

P

Human Beta-defensin 103, also known as human beta-defensin 3 (hBD-3), plays a role in immune system processes. The bactericidal immune activity of hBD-3 against various clinical isolates was evaluated by a liquid microdilution assay as shown in Figure 1. The results of that assay showed that hBD-3 used at a concentration of 4 μg/ml was bactericidal against A. baumannii (strain 3) after 3 min of incubation. hBD-3 used at a concentration of 8 μg/ml caused a bactericidal effect within 20 min of incubation against S. aureus (strain 3), E. faecium (strain 3), and P. aeruginosa (strain 3) and within 1 min against S. maltophilia (strain 4) and A. baumannii. At a concentration of 16 μg/ml, the peptide produced a bactericidal effect against S. aureus, E. faecium, P. aeruginosa, and S. maltophilia within 10, 20, 5, and 1 min, respectively.

complete
CACAO 12523

GO:0016045

detection of bacterium

PMID:16436752[1]

ECO:0000314

P

Human Beta-defensin 103, also known as human beta-defensin 3 (hBD-3), has the ability to detect bacterial cells and express bactericidal activity against them. The bactericidal activity of hBD-3 against various clinical isolates was evaluated by a liquid microdilution assay as shown in Figure 1. The results of that assay showed that hBD-3 used at a concentration of 4 μg/ml was bactericidal against A. baumannii (strain 3) after 3 min of incubation. hBD-3 used at a concentration of 8 μg/ml caused a bactericidal effect within 20 min of incubation against S. aureus (strain 3), E. faecium (strain 3), and P. aeruginosa (strain 3) and within 1 min against S. maltophilia (strain 4) and A. baumannii. At a concentration of 16 μg/ml, the peptide produced a bactericidal effect against S. aureus, E. faecium, P. aeruginosa, and S. maltophilia within 10, 20, 5, and 1 min, respectively.

complete
CACAO 12524

involved_in

GO:0050830

defense response to Gram-positive bacterium

PMID:15625724[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0050829

defense response to Gram-negative bacterium

PMID:15625724[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:15625724[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:15625724[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:15625724[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:15625724[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:15625724[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060326

cell chemotaxis

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2675345
PANTHER:PTN000464032

P

Seeded From UniProt

complete

involved_in

GO:0042742

defense response to bacterium

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1351612
MGI:MGI:1927667
MGI:MGI:2654206
MGI:MGI:2675345
PANTHER:PTN000464032
UniProtKB:O15263

P

Seeded From UniProt

complete

enables

GO:0042056

chemoattractant activity

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:2675345
PANTHER:PTN000464032

F

Seeded From UniProt

complete

enables

GO:0031731

CCR6 chemokine receptor binding

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1927667
PANTHER:PTN000464032
UniProtKB:O15263

F

Seeded From UniProt

complete

involved_in

GO:0006935

chemotaxis

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1927667
PANTHER:PTN000464032
UniProtKB:O15263

P

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000464032
UniProtKB:O15263
UniProtKB:Q6QLR1

C

Seeded From UniProt

complete

involved_in

GO:0042742

defense response to bacterium

PMID:21115716[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:21115716[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0050918

positive chemotaxis

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0042056

P

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001855

C

Seeded From UniProt

complete

involved_in

GO:0006952

defense response

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001855

P

Seeded From UniProt

complete

involved_in

GO:0050830

defense response to Gram-positive bacterium

PMID:11085990[5]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0050829

defense response to Gram-negative bacterium

PMID:11085990[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0061844

antimicrobial humoral immune response mediated by antimicrobial peptide

PMID:11085990[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:11085990[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:11085990[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:11085990[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:11085990[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:11085990[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0031640

killing of cells of other organism

PMID:11085990[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0019730

antimicrobial humoral response

Reactome:R-HSA-6803157

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005796

Golgi lumen

Reactome:R-HSA-1471322
Reactome:R-HSA-1462023

ECO:0000304

author statement supported by traceable reference used in manual assertion


C

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

Reactome:R-HSA-1974676
Reactome:R-HSA-1973968
Reactome:R-HSA-1471338
Reactome:R-HSA-1471322
Reactome:R-HSA-1467269
Reactome:R-HSA-1467209

ECO:0000304

author statement supported by traceable reference used in manual assertion






C

Seeded From UniProt

complete

involved_in

GO:0042742

defense response to bacterium

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0044

P

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0964
UniProtKB-SubCell:SL-0243

C

Seeded From UniProt

complete

involved_in

GO:0006952

defense response

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0211

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Maisetta, G et al. (2006) In vitro bactericidal activity of human beta-defensin 3 against multidrug-resistant nosocomial strains. Antimicrob. Agents Chemother. 50 806-9 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 2.4 2.5 2.6 Schulz, A et al. (2005) Engineering disulfide bonds of the novel human beta-defensins hBD-27 and hBD-28: differences in disulfide formation and biological activity among human beta-defensins. Biopolymers 80 34-49 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 3.4 3.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  4. 4.0 4.1 Augustin, DK et al. (2011) Role of defensins in corneal epithelial barrier function against Pseudomonas aeruginosa traversal. Infect. Immun. 79 595-605 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 Harder, J et al. (2001) Isolation and characterization of human beta -defensin-3, a novel human inducible peptide antibiotic. J. Biol. Chem. 276 5707-13 PubMed GONUTS page