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HUMAN:CO3A1

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) COL3A1
Protein Name(s) Collagen alpha-1(III) chain
External Links
UniProt P02461
EMBL X14420
AY054301
AY016295
KC567894
GU143397
AC066694
CH471058
CH471058
BC028178
M26939
X07240
X15332
S62925
S79877
M59312
M59227
M55603
X06700
X01655
X01742
M13146
M11134
M10795
M10615
M10793
M10794
M10800
M10801
CCDS CCDS2297.1
PIR S05272
RefSeq NP_000081.1
UniGene Hs.443625
PDB 2V53
3DMW
4AE2
4AEJ
4AK3
4GYX
PDBsum 2V53
3DMW
4AE2
4AEJ
4AK3
4GYX
ProteinModelPortal P02461
SMR P02461
BioGrid 107678
DIP DIP-57177N
IntAct P02461
MINT MINT-7299332
ChEMBL CHEMBL2364188
DrugBank DB00048
PhosphoSite P02461
DMDM 124056490
PaxDb P02461
PRIDE P02461
Ensembl ENST00000304636
ENST00000317840
GeneID 1281
KEGG hsa:1281
UCSC uc002uqj.1
CTD 1281
GeneCards GC02P189803
GeneReviews COL3A1
HGNC HGNC:2201
HPA CAB016766
HPA007583
MIM 100070
120180
130020
130050
neXtProt NX_P02461
Orphanet 2500
286
86
231160
PharmGKB PA26716
eggNOG NOG12793
GeneTree ENSGT00770000120467
HOVERGEN HBG004933
InParanoid P02461
KO K06236
OMA PGPSGHQ
OrthoDB EOG7TJ3HH
PhylomeDB P02461
TreeFam TF344135
Reactome REACT_118779
REACT_121139
REACT_13552
REACT_150180
REACT_150401
REACT_163699
REACT_163874
REACT_163906
REACT_163942
REACT_16888
REACT_18312
ChiTaRS COL3A1
EvolutionaryTrace P02461
GeneWiki Collagen,_type_III,_alpha_1
GenomeRNAi 1281
NextBio 35489581
PRO PR:P02461
Proteomes UP000005640
Bgee P02461
ExpressionAtlas P02461
Genevestigator P02461
GO GO:0005586
GO:0005788
GO:0031012
GO:0005576
GO:0005615
GO:0005201
GO:0005178
GO:0046872
GO:0048407
GO:0007568
GO:0007411
GO:0001568
GO:0007160
GO:0071230
GO:0021987
GO:0030574
GO:0030199
GO:0048565
GO:0043206
GO:0022617
GO:0030198
GO:0007507
GO:0007229
GO:0050777
GO:2001223
GO:0018149
GO:0030168
GO:0035025
GO:0034097
GO:0009612
GO:0009314
GO:0001501
GO:0043588
GO:0007179
GO:0042060
InterPro IPR008160
IPR000885
IPR001007
Pfam PF01410
PF01391
PF00093
ProDom PD002078
SMART SM00038
SM00214
PROSITE PS51461
PS01208
PS50184

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

Contributes to

GO:0032966

negative regulation of collagen biosynthetic process

PMID:24288677[1]

ECO:0000314

P

Figure 5 depicts through immunofluorescence, nAG protein expression in human fibroblast cells has an inhibitory effect on the expression of collagen I and III.

complete
CACAO 9313

Contributes to

GO:0032966

negative regulation of collagen biosynthetic process

PMID:24288677[1]

ECO:0000314

P

Figure 4 displays a western blot assay showing collagen III expression in untreated control fibroblasts and control fibroblasts treated with TGF-β1. With TGF-β1 treatment, there was also decreased collagen III expression in transfected fibroblasts. This shows that the inhibitory effect of nAG is dominant over the TGF-β1 effect.

complete
CACAO 9322

enables

GO:0030020

extracellular matrix structural constituent conferring tensile strength

PMID:28327460[2]

ECO:0007666

automatically integrated combinatorial computational and experimental evidence used in manual assertion

F

occurs_in:(CL:0002540)|occurs_in:(CL:0002570)|occurs_in:(CL:0002551)

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:28327460[2]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

part_of:(CL:0002540)|part_of:(CL:0002570)|part_of:(CL:0002551)

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:28344315[3]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

part_of:(UBERON:0002371)

Seeded From UniProt

complete

enables

GO:0030020

extracellular matrix structural constituent conferring tensile strength

PMID:28344315[3]

ECO:0007005

high throughput direct assay evidence used in manual assertion

F

occurs_in:(UBERON:0002371)

Seeded From UniProt

complete

enables

GO:0030020

extracellular matrix structural constituent conferring tensile strength

PMID:27559042[4]

ECO:0007666

automatically integrated combinatorial computational and experimental evidence used in manual assertion

F

  • occurs_in:(UBERON:0006618)
  • occurs_in:(UBERON:0002302)

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:28675934[5]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

part_of:(UBERON:0003688)|part_of:(UBERON:0001911)

Seeded From UniProt

complete

enables

GO:0030020

extracellular matrix structural constituent conferring tensile strength

PMID:28675934[5]

ECO:0007666

automatically integrated combinatorial computational and experimental evidence used in manual assertion

F

occurs_in:(UBERON:0003688)|occurs_in:(UBERON:0001911)

Seeded From UniProt

complete

enables

GO:0030020

extracellular matrix structural constituent conferring tensile strength

PMID:25037231[6]

ECO:0007666

automatically integrated combinatorial computational and experimental evidence used in manual assertion

F

occurs_in:(UBERON:0001155)

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:25037231[6]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

part_of:(UBERON:0002107)

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:25037231[6]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

part_of:(UBERON:0001155)

Seeded From UniProt

complete

enables

GO:0030020

extracellular matrix structural constituent conferring tensile strength

PMID:25037231[6]

ECO:0007666

automatically integrated combinatorial computational and experimental evidence used in manual assertion

F

occurs_in:(UBERON:0002107)

Seeded From UniProt

complete

enables

GO:0002020

protease binding

PMID:19932771[7]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P39900

F

Seeded From UniProt

complete

part_of

GO:0005586

collagen type III trimer

PMID:19932771[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

PMID:27068509[8]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

part_of:(UBERON:0007318)

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:27559042[4]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

  • part_of:(UBERON:0006618)
  • part_of:(UBERON:0002302)

Seeded From UniProt

complete

involved_in

GO:2001223

negative regulation of neuron migration

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P08121

P

Seeded From UniProt

complete

involved_in

GO:0050777

negative regulation of immune response

PMID:16754721[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0043588

skin development

PMID:9036918[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0097435

supramolecular fiber organization

PMID:14970208[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0042060

wound healing

PMID:1466622[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0042060

wound healing

PMID:14736764[13]

ECO:0000303

author statement without traceable support used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0035025

positive regulation of Rho protein signal transduction

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P08121

P

Seeded From UniProt

complete

involved_in

GO:0034097

response to cytokine

PMID:9076960[14]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0034097

response to cytokine

PMID:16360482[15]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:14970208[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:7487954[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0030199

collagen fibril organization

PMID:7546986[17]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0030199

collagen fibril organization

PMID:9036918[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0030199

collagen fibril organization

PMID:1672129[18]

ECO:0000303

author statement without traceable support used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0030168

platelet activation

PMID:9573018[19]

ECO:0000303

author statement without traceable support used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0021987

cerebral cortex development

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P08121

P

Seeded From UniProt

complete

involved_in

GO:0018149

peptide cross-linking

PMID:16754721[9]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0009314

response to radiation

PMID:14736764[13]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007507

heart development

PMID:7546986[17]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007229

integrin-mediated signaling pathway

PMID:14970208[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007179

transforming growth factor beta receptor signaling pathway

PMID:16360482[15]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0007160

cell-matrix adhesion

PMID:16912226[20]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:7487954[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:9036918[10]

ECO:0000303

author statement without traceable support used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005586

collagen type III trimer

PMID:17576241[21]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005586

collagen type III trimer

PMID:7487954[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005586

collagen type III trimer

PMID:1672129[18]

ECO:0000303

author statement without traceable support used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005201

extracellular matrix structural constituent

PMID:7487954[16]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0005201

extracellular matrix structural constituent

PMID:9036918[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0005178

integrin binding

PMID:9573018[19]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0005178

integrin binding

PMID:14970208[11]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0031012

extracellular matrix

PMID:21873635[22]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88445
MGI:MGI:88446
MGI:MGI:88452
MGI:MGI:88453
MGI:MGI:88457
MGI:MGI:88467
PANTHER:PTN002513067

C

Seeded From UniProt

complete

involved_in

GO:0030198

extracellular matrix organization

PMID:21873635[22]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1095415
MGI:MGI:2152695
MGI:MGI:2672118
MGI:MGI:88451
PANTHER:PTN002513067
WB:WBGene00001263
ZFIN:ZDB-GENE-030131-2281

P

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:21873635[22]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88452
MGI:MGI:88468
PANTHER:PTN002513067
RGD:61817
RGD:70936
RGD:727898
UniProtKB:P02452
UniProtKB:P02458
UniProtKB:P02461
UniProtKB:P08123
UniProtKB:Q9BXS0

C

Seeded From UniProt

complete

part_of

GO:0005586

collagen type III trimer

PMID:21873635[22]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88453
PANTHER:PTN002770836
UniProtKB:P02461

C

Seeded From UniProt

complete

enables

GO:0005201

extracellular matrix structural constituent

PMID:21873635[22]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:104687
MGI:MGI:2672118
MGI:MGI:88457
MGI:MGI:88467
PANTHER:PTN002513067
UniProtKB:P02461
UniProtKB:P02462
UniProtKB:P53420

F

Seeded From UniProt

complete

enables

GO:0048407

platelet-derived growth factor binding

PMID:8900172[23]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:2001223

negative regulation of neuron migration

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

P

Seeded From UniProt

complete

involved_in

GO:0071230

cellular response to amino acid stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

P

Seeded From UniProt

complete

involved_in

GO:0060414

aorta smooth muscle tissue morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

P

Seeded From UniProt

complete

involved_in

GO:0048565

digestive tract development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

P

Seeded From UniProt

complete

enables

GO:0046332

SMAD binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

F

Seeded From UniProt

complete

involved_in

GO:0035025

positive regulation of Rho protein signal transduction

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

P

Seeded From UniProt

complete

part_of

GO:0031012

extracellular matrix

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

C

Seeded From UniProt

complete

involved_in

GO:0030199

collagen fibril organization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

P

Seeded From UniProt

complete

involved_in

GO:0021987

cerebral cortex development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

P

Seeded From UniProt

complete

part_of

GO:0005586

collagen type III trimer

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

C

Seeded From UniProt

complete

part_of

GO:0005581

collagen trimer

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

C

Seeded From UniProt

complete

involved_in

GO:0001568

blood vessel development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P08121
ensembl:ENSMUSP00000085192

P

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P13941
ensembl:ENSRNOP00000004956

C

Seeded From UniProt

complete

involved_in

GO:0009612

response to mechanical stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P13941
ensembl:ENSRNOP00000004956

P

Seeded From UniProt

complete

involved_in

GO:0001501

skeletal system development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P13941
ensembl:ENSRNOP00000004956

P

Seeded From UniProt

complete

enables

GO:0005201

extracellular matrix structural constituent

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000885

F

Seeded From UniProt

complete

colocalizes_with

GO:0062023

collagen-containing extracellular matrix

PMID:22261194[24]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

part_of:(UBERON:0002084)

Seeded From UniProt

complete

involved_in

GO:0050776

regulation of immune response

Reactome:R-HSA-198933

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0030198

extracellular matrix organization

Reactome:R-HSA-1474244

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005788

endoplasmic reticulum lumen

Reactome:R-HSA-8944240
Reactome:R-HSA-2089971
Reactome:R-HSA-2022073
Reactome:R-HSA-2002460
Reactome:R-HSA-1650808

ECO:0000304

author statement supported by traceable reference used in manual assertion





C

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

Reactome:R-HSA-5696357
Reactome:R-HSA-5696356
Reactome:R-HSA-382054
Reactome:R-HSA-375151
Reactome:R-HSA-2473584
Reactome:R-HSA-2465890
Reactome:R-HSA-2396370
Reactome:R-HSA-2327909
Reactome:R-HSA-2327738
Reactome:R-HSA-2327733
Reactome:R-HSA-2327695
Reactome:R-HSA-2213201
Reactome:R-HSA-2089971
Reactome:R-HSA-2002440
Reactome:R-HSA-2002428
Reactome:R-HSA-1474266
Reactome:R-HSA-1474213
Reactome:R-HSA-1474210
Reactome:R-HSA-1454757

ECO:0000304

author statement supported by traceable reference used in manual assertion



















C

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0964

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

part_of

GO:0005581

collagen trimer

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0176

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Al-Qattan, MM et al. (2013) Salamander-derived, human-optimized nAG protein suppresses collagen synthesis and increases collagen degradation in primary human fibroblasts. Biomed Res Int 2013 384091 PubMed GONUTS page
  2. 2.0 2.1 Ragelle, H et al. (2017) Comprehensive proteomic characterization of stem cell-derived extracellular matrices. Biomaterials 128 147-159 PubMed GONUTS page
  3. 3.0 3.1 Glavey, SV et al. (2017) Proteomic characterization of human multiple myeloma bone marrow extracellular matrix. Leukemia 31 2426-2434 PubMed GONUTS page
  4. 4.0 4.1 Barallobre-Barreiro, J et al. (2016) Glycoproteomics Reveals Decorin Peptides With Anti-Myostatin Activity in Human Atrial Fibrillation. Circulation 134 817-32 PubMed GONUTS page
  5. 5.0 5.1 Naba, A et al. (2017) Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics. J. Proteome Res. 16 3083-3091 PubMed GONUTS page
  6. 6.0 6.1 6.2 6.3 Naba, A et al. (2014) Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver. BMC Cancer 14 518 PubMed GONUTS page
  7. 7.0 7.1 Taddese, S et al. (2010) MMP-12 catalytic domain recognizes and cleaves at multiple sites in human skin collagen type I and type III. Biochim. Biophys. Acta 1804 731-9 PubMed GONUTS page
  8. Barallobre-Barreiro, J et al. (2016) Extracellular matrix remodelling in response to venous hypertension: proteomics of human varicose veins. Cardiovasc. Res. 110 419-30 PubMed GONUTS page
  9. 9.0 9.1 Lebbink, RJ et al. (2006) Collagens are functional, high affinity ligands for the inhibitory immune receptor LAIR-1. J. Exp. Med. 203 1419-25 PubMed GONUTS page
  10. 10.0 10.1 10.2 10.3 Smith, LT et al. (1997) Mutations in the COL3A1 gene result in the Ehlers-Danlos syndrome type IV and alterations in the size and distribution of the major collagen fibrils of the dermis. J. Invest. Dermatol. 108 241-7 PubMed GONUTS page
  11. 11.0 11.1 11.2 11.3 Zoppi, N et al. (2004) Human fibroblasts with mutations in COL5A1 and COL3A1 genes do not organize collagens and fibronectin in the extracellular matrix, down-regulate alpha2beta1 integrin, and recruit alphavbeta3 Instead of alpha5beta1 integrin. J. Biol. Chem. 279 18157-68 PubMed GONUTS page
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