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ECOLI:SSB
Contents
| Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
| Gene Name(s) | ssb (synonyms: exrB, lexC) | |
| Protein Name(s) | Single-stranded DNA-binding protein (ECO:0000255 with HAMAP-Rule:MF_00984)
SSB (ECO:0000255 with HAMAP-Rule:MF_00984) Helix-destabilizing protein | |
| External Links | ||
| UniProt | P0AGE0 | |
| EMBL | J01704 U00006 U00096 AP009048 | |
| PIR | B65214 | |
| RefSeq | NP_418483.1 YP_492202.1 | |
| PDB | 1EQQ 1EYG 1KAW 1QVC 1SRU 3C94 3SXU 3UF7 4MZ9 | |
| PDBsum | 1EQQ 1EYG 1KAW 1QVC 1SRU 3C94 3SXU 3UF7 4MZ9 | |
| ProteinModelPortal | P0AGE0 | |
| SMR | P0AGE0 | |
| DIP | DIP-35980N | |
| IntAct | P0AGE0 | |
| MINT | MINT-8298796 | |
| STRING | 511145.b4059 | |
| SWISS-2DPAGE | P0AGE0 | |
| PaxDb | P0AGE0 | |
| PRIDE | P0AGE0 | |
| EnsemblBacteria | AAC77029 BAE78061 | |
| GeneID | 12933677 948570 | |
| KEGG | ecj:Y75_p3946 eco:b4059 | |
| PATRIC | 32123663 | |
| EchoBASE | EB0969 | |
| EcoGene | EG10976 | |
| eggNOG | COG0629 | |
| HOGENOM | HOG000106483 | |
| InParanoid | P0AGE0 | |
| KO | K03111 | |
| OMA | QQYNEPP | |
| OrthoDB | EOG6M9F32 | |
| PhylomeDB | P0AGE0 | |
| BioCyc | EcoCyc:EG10976-MONOMER ECOL316407:JW4020-MONOMER | |
| EvolutionaryTrace | P0AGE0 | |
| PRO | PR:P0AGE0 | |
| Proteomes | UP000000318 UP000000625 | |
| Genevestigator | P0AGE0 | |
| GO | GO:0003697 GO:0006260 GO:0006298 GO:0000725 GO:0009432 | |
| Gene3D | 2.40.50.140 | |
| HAMAP | MF_00984 | |
| InterPro | IPR012340 IPR000424 IPR011344 | |
| PANTHER | PTHR10302 | |
| Pfam | PF00436 | |
| PIRSF | PIRSF002070 | |
| SUPFAM | SSF50249 | |
| TIGRFAMs | TIGR00621 | |
| PROSITE | PS50935 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0043085 |
positive regulation of catalytic activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008047 |
enzyme activator activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051096 |
positive regulation of helicase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000033807 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10976 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006260 |
DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000119535 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006260 |
DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000119535 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000119535 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000119535 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009432 |
SOS response |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006298 |
mismatch repair |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000725 |
recombinational repair |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006260 |
DNA replication |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Lu, D & Keck, JL (2008) Structural basis of Escherichia coli single-stranded DNA-binding protein stimulation of exonuclease I. Proc. Natl. Acad. Sci. U.S.A. 105 9169-74 PubMed GONUTS page
- ↑ 2.0 2.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 3.0 3.1 Sigal, N et al. (1972) A DNA-unwinding protein isolated from Escherichia coli: its interaction with DNA and with DNA polymerases. Proc. Natl. Acad. Sci. U.S.A. 69 3537-41 PubMed GONUTS page
- ↑ 4.0 4.1 Weiner, JH et al. (1975) The deoxyribonucleic acid unwinding protein of Escherichia coli. Properties and functions in replication. J. Biol. Chem. 250 1972-80 PubMed GONUTS page
- ↑ Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Meyer, RR & Laine, PS (1990) The single-stranded DNA-binding protein of Escherichia coli. Microbiol. Rev. 54 342-80 PubMed GONUTS page
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