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ECOLI:RS6

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Species (Taxon ID) Escherichia coli (strain K12). (83333)
Gene Name(s) rpsF
Protein Name(s) 30S ribosomal protein S6

30S ribosomal protein S6, fully modified isoform 30S ribosomal protein S6, non-modified isoform

External Links
UniProt P02358
EMBL X04022
U14003
U00096
AP009048
PIR C65231
RefSeq NP_418621.5
YP_492342.1
PDB 1EG0
1M5G
1P6G
1P87
1VS5
1VS7
2AVY
2AW7
2GY9
2GYB
2I2P
2I2U
2QAL
2QAN
2QB9
2QBB
2QBD
2QBF
2QBH
2QBJ
2QOU
2QOW
2QOY
2QP0
2VHO
2VHP
2WWL
2YKR
2Z4K
2Z4M
3DF1
3DF3
3E1A
3E1C
3FIH
3I1M
3I1O
3I1Q
3I1S
3I1Z
3I21
3IY8
3IZV
3IZW
3J00
3J0U
3J0V
3J0X
3J0Z
3J10
3J13
3J18
3J36
3J4V
3J4W
3J4Y
3J4Z
3J53
3J55
3J57
3J59
3J5B
3J5D
3J5F
3J5H
3J5J
3J5N
3J5T
3J5X
3KC4
3OAQ
3OAR
3OFA
3OFB
3OFO
3OFP
3OFX
3OFY
3OR9
3ORA
3SFS
3UOQ
4A2I
4ADV
4GAQ
4GAS
4GD1
4GD2
4KIY
4KJ0
4KJ2
4KJ4
4KJ6
4KJ8
4KJA
4KJC
4PE9
4PEA
4TOL
4TON
4TOU
4TOW
4TP0
4TP2
4TP4
4TP6
4TP8
4TPA
4TPC
4TPE
4WAO
4WAQ
PDBsum 1EG0
1M5G
1P6G
1P87
1VS5
1VS7
2AVY
2AW7
2GY9
2GYB
2I2P
2I2U
2QAL
2QAN
2QB9
2QBB
2QBD
2QBF
2QBH
2QBJ
2QOU
2QOW
2QOY
2QP0
2VHO
2VHP
2WWL
2YKR
2Z4K
2Z4M
3DF1
3DF3
3E1A
3E1C
3FIH
3I1M
3I1O
3I1Q
3I1S
3I1Z
3I21
3IY8
3IZV
3IZW
3J00
3J0U
3J0V
3J0X
3J0Z
3J10
3J13
3J18
3J36
3J4V
3J4W
3J4Y
3J4Z
3J53
3J55
3J57
3J59
3J5B
3J5D
3J5F
3J5H
3J5J
3J5N
3J5T
3J5X
3KC4
3OAQ
3OAR
3OFA
3OFB
3OFO
3OFP
3OFX
3OFY
3OR9
3ORA
3SFS
3UOQ
4A2I
4ADV
4GAQ
4GAS
4GD1
4GD2
4KIY
4KJ0
4KJ2
4KJ4
4KJ6
4KJ8
4KJA
4KJC
4PE9
4PEA
4TOL
4TON
4TOU
4TOW
4TP0
4TP2
4TP4
4TP6
4TP8
4TPA
4TPC
4TPE
4WAO
4WAQ
ProteinModelPortal P02358
SMR P02358
DIP DIP-10782N
IntAct P02358
MINT MINT-1279331
STRING 511145.b4200
ChEMBL CHEMBL2363135
SWISS-2DPAGE P02358
PaxDb P02358
PRIDE P02358
EnsemblBacteria AAC77157
BAE78201
GeneID 12930647
948723
KEGG ecj:Y75_p4086
eco:b4200
PATRIC 48667972
EchoBASE EB0898
EcoGene EG10905
eggNOG COG0360
HOGENOM HOG000040438
InParanoid P02358
KO K02990
OMA ITEASPM
PhylomeDB P02358
BioCyc EcoCyc:EG10905-MONOMER
ECOL316407:JW4158-MONOMER
EvolutionaryTrace P02358
PRO PR:P02358
Proteomes UP000000318
UP000000625
Genevestigator P02358
GO GO:0022627
GO:0048027
GO:0070181
GO:0003735
GO:0006412
Gene3D 3.30.70.60
HAMAP MF_00360
InterPro IPR000529
IPR020815
IPR020814
IPR014717
Pfam PF01250
SUPFAM SSF54995
TIGRFAMs TIGR00166
PROSITE PS01048

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0070181

small ribosomal subunit rRNA binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10905
PANTHER:PTN001077198

F

Seeded From UniProt

complete

part_of

GO:0022627

cytosolic small ribosomal subunit

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10905
PANTHER:PTN001077242

C

Seeded From UniProt

complete

enables

GO:0003735

structural constituent of ribosome

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001077198
SGD:S000001486

F

Seeded From UniProt

complete

part_of

GO:0022627

cytosolic small ribosomal subunit

PMID:4587209[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0070181

small ribosomal subunit rRNA binding

PMID:6208366[3]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0048027

mRNA 5'-UTR binding

PMID:23980204[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0022627

cytosolic small ribosomal subunit

PMID:4942549[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:18304323[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:15911532[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003735

structural constituent of ribosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000529
InterPro:IPR020814
InterPro:IPR020815
InterPro:IPR035980

F

Seeded From UniProt

complete

part_of

GO:0005840

ribosome

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000529
InterPro:IPR020814
InterPro:IPR020815
InterPro:IPR035980

C

Seeded From UniProt

complete

involved_in

GO:0006412

translation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000529
InterPro:IPR020814
InterPro:IPR020815
InterPro:IPR035980

P

Seeded From UniProt

complete

enables

GO:0019843

rRNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000529
InterPro:IPR020814
InterPro:IPR020815
InterPro:IPR035980

F

Seeded From UniProt

complete

enables

GO:0019843

rRNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000084122

F

Seeded From UniProt

complete

involved_in

GO:0006412

translation

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000084122

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

part_of

GO:0005840

ribosome

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0689

C

Seeded From UniProt

complete

enables

GO:0019843

rRNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0699

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  2. Wittmann-Liebold, B (1973) Studies on the primary structure of 20 proteins from Escherichia coli ribosomes by means of an improved protein sequenator. FEBS Lett. 36 247-9 PubMed GONUTS page
  3. Gregory, RJ et al. (1984) Interaction of ribosomal proteins S6, S8, S15 and S18 with the central domain of 16 S ribosomal RNA from Escherichia coli. J. Mol. Biol. 178 287-302 PubMed GONUTS page
  4. Matelska, D et al. (2013) S6:S18 ribosomal protein complex interacts with a structural motif present in its own mRNA. RNA 19 1341-8 PubMed GONUTS page
  5. Hindennach, I et al. (1971) Ribosomal proteins. Isolation of the proteins from 30S ribosomal subunits of Escherichia coli. Eur. J. Biochem. 23 7-11 PubMed GONUTS page
  6. Ishihama, Y et al. (2008) Protein abundance profiling of the Escherichia coli cytosol. BMC Genomics 9 102 PubMed GONUTS page
  7. Lopez-Campistrous, A et al. (2005) Localization, annotation, and comparison of the Escherichia coli K-12 proteome under two states of growth. Mol. Cell Proteomics 4 1205-9 PubMed GONUTS page