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DROME:NETB
Contents
| Species (Taxon ID) | Drosophila melanogaster (Fruit fly). (7227) | |
| Gene Name(s) | NetB | |
| Protein Name(s) | Netrin-B | |
| External Links | ||
| UniProt | Q24568 | |
| EMBL | U60317 U63737 AE014298 | |
| RefSeq | NP_001162753.1 NP_001162754.1 NP_001162755.1 NP_001245668.1 NP_001245669.1 NP_511155.1 | |
| UniGene | Dm.3913 | |
| ProteinModelPortal | Q24568 | |
| SMR | Q24568 | |
| BioGrid | 58761 | |
| IntAct | Q24568 | |
| MINT | MINT-1334555 | |
| STRING | 7227.FBpp0291228 | |
| PaxDb | Q24568 | |
| PRIDE | Q24568 | |
| EnsemblMetazoa | FBtr0073940 FBtr0302016 FBtr0302017 FBtr0302018 FBtr0304874 FBtr0304875 | |
| GeneID | 32400 | |
| KEGG | dme:Dmel_CG10521 | |
| CTD | 32400 | |
| FlyBase | FBgn0015774 | |
| eggNOG | KOG3512 ENOG410XS7U | |
| GeneTree | ENSGT00830000128257 | |
| InParanoid | Q24568 | |
| OMA | HSANECK | |
| OrthoDB | EOG7SR4KJ | |
| PhylomeDB | Q24568 | |
| Reactome | R-DME-373752 R-DME-418885 | |
| ChiTaRS | NetB | |
| GenomeRNAi | 32400 | |
| NextBio | 778273 | |
| PRO | PR:Q24568 | |
| Proteomes | UP000000803 | |
| Bgee | Q24568 | |
| Genevisible | Q24568 | |
| GO | GO:0005578 GO:0007411 GO:0070983 GO:0008347 GO:0008045 GO:2000289 GO:0007432 GO:0016200 GO:0008039 | |
| Gene3D | 2.60.120.260 | |
| InterPro | IPR008979 IPR002049 IPR008211 IPR001134 IPR018933 IPR008993 | |
| Pfam | PF00053 PF00055 PF01759 | |
| SMART | SM00643 SM00180 SM00136 | |
| SUPFAM | SSF50242 | |
| PROSITE | PS00022 PS01248 PS50027 PS51117 PS50189 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009405 |
pathogenesis |
ECO:0000255 |
|
P |
Figure 1 shows the healthy and diseased avian species that C. perfringens isolates were obtained from after an NE outbreak. PCR testing was carried out and sequence analysis showed that 92% of isolates were positive for netB. |
complete | ||||
|
part_of |
GO:0044295 |
axonal growth cone |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0048749 |
compound eye development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0048749 |
compound eye development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0044295 |
axonal growth cone |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
exists_during:(GO:0035209) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000540) |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:2000289 |
regulation of photoreceptor cell axon guidance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008347 |
glial cell migration |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008039 |
synaptic target recognition |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007411 |
axon guidance |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
FB:FBgn0015773 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007411 |
axon guidance |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
FB:FBgn0034013 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007432 |
salivary gland boundary specification |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008045 |
motor neuron axon guidance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0070983 |
dendrite guidance |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
FB:FBgn0015773 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007411 |
axon guidance |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
Missing: with/from | |||
|
part_of |
GO:0031012 |
extracellular matrix |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
Missing: with/from | |||
|
involved_in |
GO:0016200 |
synaptic target attraction |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chalmers, G et al. (2008) Multilocus sequence typing analysis of Clostridium perfringens isolates from necrotic enteritis outbreaks in broiler chicken populations. J. Clin. Microbiol. 46 3957-64 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Akin, O & Zipursky, SL (2016) Frazzled promotes growth cone attachment at the source of a Netrin gradient in the visual system. Elife 5 PubMed GONUTS page
- ↑ 3.0 3.1 Peng, J et al. (2018) Fezf coordinates laminar-specific connectivity through cell-intrinsic and cell-extrinsic mechanisms. Elife 7 PubMed GONUTS page
- ↑ Timofeev, K et al. (2012) Localized netrins act as positional cues to control layer-specific targeting of photoreceptor axons in Drosophila. Neuron 75 80-93 PubMed GONUTS page
- ↑ von Hilchen, CM et al. (2010) Netrins guide migration of distinct glial cells in the Drosophila embryo. Development 137 1251-62 PubMed GONUTS page
- ↑ Kurusu, M et al. (2008) A screen of cell-surface molecules identifies leucine-rich repeat proteins as key mediators of synaptic target selection. Neuron 59 972-85 PubMed GONUTS page
- ↑ 7.0 7.1 Brankatschk, M & Dickson, BJ (2006) Netrins guide Drosophila commissural axons at short range. Nat. Neurosci. 9 188-94 PubMed GONUTS page
- ↑ Kolesnikov, T & Beckendorf, SK (2005) NETRIN and SLIT guide salivary gland migration. Dev. Biol. 284 102-11 PubMed GONUTS page
- ↑ Labrador, JP et al. (2005) The homeobox transcription factor even-skipped regulates netrin-receptor expression to control dorsal motor-axon projections in Drosophila. Curr. Biol. 15 1413-9 PubMed GONUTS page
- ↑ Furrer, MP et al. (2003) Robo and Frazzled/DCC mediate dendritic guidance at the CNS midline. Nat. Neurosci. 6 223-30 PubMed GONUTS page
- ↑ 11.0 11.1 Hynes, RO & Zhao, Q (2000) The evolution of cell adhesion. J. Cell Biol. 150 F89-96 PubMed GONUTS page
- ↑ Chiba, A (1999) Early development of the Drosophila neuromuscular junction: a model for studying neuronal networks in development. Int. Rev. Neurobiol. 43 1-24 PubMed GONUTS page
