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DANRE:Q1LUT2
Contents
| Species (Taxon ID) | Danio rerio (Zebrafish) (Brachydanio rerio). (7955) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | DNA topoisomerase 2 (ECO:0000256 with RuleBase:RU000381) | |
| External Links | ||
| UniProt | Q1LUT2 | |
| EMBL | BX927238 CR391921 | |
| RefSeq | NP_001038656.1 | |
| UniGene | Dr.105756 | |
| ProteinModelPortal | Q1LUT2 | |
| SMR | Q1LUT2 | |
| Ensembl | ENSDART00000130695 | |
| GeneID | 569877 | |
| KEGG | dre:569877 | |
| CTD | 7155 | |
| ZFIN | ZDB-GENE-041008-136 | |
| GeneTree | ENSGT00390000016222 | |
| HOGENOM | HOG000216693 | |
| HOVERGEN | HBG052998 | |
| InParanoid | Q1LUT2 | |
| KO | K03164 | |
| OMA | CHPPKIT | |
| OrthoDB | EOG73JKTM | |
| PhylomeDB | Q1LUT2 | |
| TreeFam | TF105282 | |
| NextBio | 20889886 | |
| PRO | PR:Q1LUT2 | |
| Proteomes | UP000000437 | |
| GO | GO:0009330 GO:0005634 GO:0005524 GO:0008301 GO:0003918 GO:0006200 GO:0007412 GO:0006265 GO:0006268 GO:0044774 GO:0006312 GO:0000712 GO:0010842 GO:0031290 GO:0000819 | |
| Gene3D | 1.10.268.10 3.30.1360.40 3.30.230.10 3.30.565.10 3.40.50.670 3.90.199.10 | |
| InterPro | IPR024946 IPR012542 IPR003594 IPR020568 IPR014721 IPR028467 IPR001241 IPR002205 IPR013758 IPR013757 IPR013506 IPR013759 IPR013760 IPR018522 IPR006171 | |
| PANTHER | PTHR10169:SF36 | |
| Pfam | PF00204 PF00521 PF08070 PF02518 PF01751 | |
| PRINTS | PR00418 | |
| SMART | SM00387 SM00433 SM00434 | |
| SUPFAM | SSF54211 SSF55874 SSF56719 | |
| PROSITE | PS00177 PS50880 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0031290 |
retinal ganglion cell axon guidance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-110729-5 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0010842 |
retina layer formation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-110729-5 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0007412 |
axon target recognition |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-110729-5 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0044774 |
mitotic DNA integrity checkpoint |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000018888 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003732 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000819 |
sister chromatid segregation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003732 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000712 |
resolution of meiotic recombination intermediates |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000018888 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001154 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003918 |
DNA topoisomerase type II (ATP-hydrolyzing) activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001154 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001154 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006259 |
DNA metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006265 |
DNA topological change |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001154 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0061505 |
DNA topoisomerase II activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003918 |
DNA topoisomerase type II (ATP-hydrolyzing) activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003916 |
DNA topoisomerase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016853 |
isomerase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Nevin, LM et al. (2011) Topoisomerase IIbeta is required for lamina-specific targeting of retinal ganglion cell axons and dendrites. Development 138 2457-65 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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