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DANRE:CELF1

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Species (Taxon ID) Danio rerio (Zebrafish) (Brachydanio rerio). (7955)
Gene Name(s) celf1 (synonyms: brul, cugbp1)
Protein Name(s) CUGBP Elav-like family member 1

CELF-1 Bruno-like protein 2 CUG triplet repeat RNA-binding protein 1 CUG-BP1 CUG-BP- and ETR-3-like factor 1 EDEN-BP/Bruno-like protein RNA-binding protein BRUNOL-2

External Links
UniProt Q9IBD0
EMBL AB032726
BC049453
RefSeq NP_571688.1
XP_005169052.1
UniGene Dr.133224
Dr.75890
ProteinModelPortal Q9IBD0
SMR Q9IBD0
PRIDE Q9IBD0
Ensembl ENSDART00000018448
ENSDART00000041055
ENSDART00000134570
GeneID 58137
KEGG dre:58137
CTD 10658
ZFIN ZDB-GENE-000501-1
eggNOG NOG251494
GeneTree ENSGT00560000076837
HOGENOM HOG000004754
HOVERGEN HBG107646
InParanoid Q9IBD0
KO K13207
OrthoDB EOG7DVDBR
PhylomeDB Q9IBD0
NextBio 20892387
PRO PR:Q9IBD0
Proteomes UP000000437
Bgee Q9IBD0
GO GO:0005737
GO:0005634
GO:0000166
GO:0003723
GO:0006397
GO:0008380
Gene3D 3.30.70.330
InterPro IPR002343
IPR012677
IPR000504
Pfam PF00076
PRINTS PR00961
SMART SM00360
PROSITE PS50102

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0001889

liver development

PMID:24005864[1]

IMP: Inferred from Mutant Phenotype

P

Figure 2 A-F illustrates deficiencies in mutants to correctly form the liver.

complete
CACAO 8914

GO:0061113

pancreas morphogenesis

PMID:24005864[1]

IMP: Inferred from Mutant Phenotype

P

Figure 2 G-I illustrates deficiencies in pancreas morphogenesis.

complete
CACAO 8915

GO:0048588

developmental cell growth

PMID:24005864[1]

IMP: Inferred from Mutant Phenotype

P

Figure 3 shows a decrease in endodermal cell growth with KD mutants.

complete
CACAO 8916

GO:0016477

cell migration

PMID:24005864[1]

IMP: Inferred from Mutant Phenotype

P

Figure 4

complete
CACAO 8917

GO:0000166

nucleotide binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR012677

F

Seeded From UniProt

complete

GO:0001889

liver development

PMID:24005864[1]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0003676

nucleic acid binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000504

F

Seeded From UniProt

complete

GO:0003723

RNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR002343

F

Seeded From UniProt

complete

GO:0003723

RNA binding

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0539

C

Seeded From UniProt

complete

GO:0005634

nucleus

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

GO:0005737

cytoplasm

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0963

C

Seeded From UniProt

complete

GO:0005737

cytoplasm

GO_REF:0000039

IEA: Inferred from Electronic Annotation

UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

GO:0006397

mRNA processing

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0507

P

Seeded From UniProt

complete

GO:0008380

RNA splicing

GO_REF:0000037

IEA: Inferred from Electronic Annotation

UniProtKB-KW:KW-0508

P

Seeded From UniProt

complete

GO:0016477

cell migration

PMID:24005864[1]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0048588

developmental cell growth

PMID:24005864[1]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

GO:0061113

pancreas morphogenesis

PMID:24005864[1]

IMP: Inferred from Mutant Phenotype

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Tahara, N et al. (2013) Celf1 is required for formation of endoderm-derived organs in zebrafish. Int J Mol Sci 14 18009-23 PubMed GONUTS page