name: ciliary plasm
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def: "All of the contents of a cilium, excluding the plasma membrane surrounding the cilium." [GOC:BHF, GOC:cilia, GOC:dos, PMID:17895364]
comment: Note that we deem cilium and microtubule-based flagellum to be equivalent. Also, researchers consider the composition of both the plasm and the membrane of the cilium to be detectably different from that in the non-ciliary cytosol and plasma membrane (e.g. in terms of calcium ion concentration, membrane lipid composition, and more). For this reason, the term "ciliary plasm" is not linked to "cytoplasm".
synonym: "cilial cytoplasm" RELATED 
synonym: "ciliary cytoplasm" RELATED 
synonym: "cilium cytoplasm" RELATED 
synonym: "cilium plasm" EXACT 
synonym: "microtubule-based flagellar cytoplasm" RELATED 
synonym: "microtubule-based flagellar matrix" NARROW 
synonym: "microtubule-based flagellum cytoplasm" RELATED 
synonym: "microtubule-based flagellum matrix" NARROW 
is_a: GO:0032838 ! plasma membrane bounded cell projection cytoplasm
relationship: part_of: GO:0005929 ! cilium
intersection_of: GO:0005737 ! cytoplasm
intersection_of: part_of GO:0005929 ! cilium
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