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CHLRE:DYHC2

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Species (Taxon ID) Chlamydomonas reinhardtii (Chlamydomonas smithii). (3055)
Gene Name(s) DHC1B (synonyms: DHC2)
Protein Name(s) Cytoplasmic dynein 2 heavy chain 1

Cytoplasmic dynein heavy chain 1b cDHC1b

External Links
UniProt Q9SMH5
EMBL AJ132478
DS496110
AF096277
PIR T34340
RefSeq XP_001696428.1
UniGene Cre.8127
ProteinModelPortal Q9SMH5
STRING 3055.JGI24009
GeneID 5722214
KEGG cre:CHLREDRAFT_24009
eggNOG COG5245
InParanoid Q9SMH5
KO K10414
Proteomes UP000006906
GO GO:0005858
GO:0005930
GO:0097014
GO:0030286
GO:0005874
GO:0031514
GO:0005886
GO:0005524
GO:0016887
GO:0003777
GO:0003774
GO:0072594
GO:0008152
GO:0007018
GO:0044458
GO:0007275
Gene3D 3.40.50.300
InterPro IPR003593
IPR011704
IPR026983
IPR026815
IPR024743
IPR024317
IPR004273
IPR013594
IPR013602
IPR027417
PANTHER PTHR10676
PTHR10676:SF34
Pfam PF07728
PF12780
PF08385
PF08393
PF03028
PF12777
SMART SM00382
SUPFAM SSF52540

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0033198

response to ATP

PMID 17895364

ECO:0000314

P

Washing with ATP dissociates DHC1b from axenome. Possible through mechanism of DHC1b known to be an ATPase Fig 2c

Missing: reference

GO:0060341

regulation of cellular localization

PMID 17895364

ECO:0000315

P

Figure 7 b shows abnormal localisation of FAP133 in mutant strains

Missing: reference

GO:0005515

protein binding

PMID 17895364

ECO:0000021

UniProtKB:A8L3B3


F

Figue 6B. Protein is brought down by FAP133 abtibody

Missing: reference

enables

GO:0045503

dynein light chain binding

PMID:7579689[1]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q39604

F

Seeded From UniProt

complete

part_of

GO:0097014

ciliary plasm

PMID:17895364[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0072594

establishment of protein localization to organelle

PMID:12802074[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0044458

motile cilium assembly

PMID:12802074[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

colocalizes_with

GO:0036064

ciliary basal body

PMID:12802074[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0031514

motile cilium

PMID:16527740[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

colocalizes_with

GO:0030992

intraciliary transport particle B

PMID:16527740[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0030286

dynein complex

PMID:17895364[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0030990

intraciliary transport particle

PMID:12802074[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005868

cytoplasmic dynein complex

PMID:12802074[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0030990

intraciliary transport particle

PMID:17895364[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0051959

dynein light intermediate chain binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:103147
PANTHER:PTN000743491
RGD:71042
UniProtKB:Q14204

F

Seeded From UniProt

complete

enables

GO:0045505

dynein intermediate chain binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000743491
dictyBase:DDB_G0276355

F

Seeded From UniProt

complete

enables

GO:0045503

dynein light chain binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000743491
UniProtKB:A8I3X6
UniProtKB:A8I5C3
UniProtKB:A8ISA6
UniProtKB:A8IV22
UniProtKB:A8JDH8
UniProtKB:Q9SMH5

F

Seeded From UniProt

complete

part_of

GO:0030286

dynein complex

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0261797
PANTHER:PTN000743491
UniProtKB:Q96JB1
UniProtKB:Q9SMH5

C

Seeded From UniProt

complete

enables

GO:0008569

ATP-dependent microtubule motor activity, minus-end-directed

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000743491
SGD:S000001762
UniProtKB:A8JDH8
UniProtKB:P45444
UniProtKB:Q14204
UniProtKB:Q8NCM8

F

Seeded From UniProt

complete

involved_in

GO:0007018

microtubule-based movement

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0261797
PANTHER:PTN000743491

P

Seeded From UniProt

complete

enables

GO:0003777

microtubule motor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004273
InterPro:IPR026815
InterPro:IPR026983

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR035699

F

Seeded From UniProt

complete

involved_in

GO:0007018

microtubule-based movement

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004273
InterPro:IPR026815
InterPro:IPR026983

P

Seeded From UniProt

complete

part_of

GO:0030286

dynein complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR004273

C

Seeded From UniProt

complete

enables

GO:0003774

motor activity

PMID:12802074[3]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005929

cilium

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0969

C

Seeded From UniProt

complete

part_of

GO:0005856

cytoskeleton

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0206

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0003774

motor activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0243

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

involved_in

GO:0030030

cell projection organization

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0970

P

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

part_of

GO:0042995

cell projection

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0966

C

Seeded From UniProt

complete

part_of

GO:0030286

dynein complex

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0243

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

part_of

GO:0005874

microtubule

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0493

C

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

part_of

GO:0031514

motile cilium

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0282

C

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ LeDizet, M & Piperno, G (1995) The light chain p28 associates with a subset of inner dynein arm heavy chains in Chlamydomonas axonemes. Mol. Biol. Cell 6 697-711 PubMed GONUTS page
  2. ↑ 2.0 2.1 2.2 Rompolas, P et al. (2007) Chlamydomonas FAP133 is a dynein intermediate chain associated with the retrograde intraflagellar transport motor. J. Cell. Sci. 120 3653-65 PubMed GONUTS page
  3. ↑ 3.0 3.1 3.2 3.3 3.4 3.5 Perrone, CA et al. (2003) A novel dynein light intermediate chain colocalizes with the retrograde motor for intraflagellar transport at sites of axoneme assembly in chlamydomonas and Mammalian cells. Mol. Biol. Cell 14 2041-56 PubMed GONUTS page
  4. ↑ 4.0 4.1 Pedersen, LB et al. (2006) Dissecting the molecular mechanisms of intraflagellar transport in chlamydomonas. Curr. Biol. 16 450-9 PubMed GONUTS page
  5. ↑ 5.0 5.1 5.2 5.3 5.4 5.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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