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CRYNJ:PACC

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Species (Taxon ID) Cryptococcus neoformans var. neoformans serotype D (strain JEC21 /ATCC MYA-565) (Filobasidiella neoformans). (214684)
Gene Name(s) RIM101
Protein Name(s) pH-response transcription factor pacC/RIM101
External Links
UniProt P0CS62
EMBL AE017348
RefSeq XP_572292.1
UniGene Fne.2804
ProteinModelPortal P0CS62
EnsemblFungi [example_ID AAW44985]
GeneID 3259088
KEGG cne:CNH00970
InParanoid P0CS62
OMA NDESTHS
OrthoDB EOG75F4P2
Proteomes UP000002149
GO GO:0005737
GO:0005634
GO:0003677
GO:0046872
GO:0006355
GO:0006351
Gene3D 3.30.160.60
InterPro IPR007087
IPR015880
IPR013087
SMART SM00355
PROSITE PS00028
PS50157

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005634

nucleus

PMID:20174553[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

GO:0005634

nucleus

PMID:20174553[1]

ECO:0000314

C

Figure 3

complete
CACAO 2308

involved_in

GO:0006351

transcription, DNA-templated

PMID:20174553[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

GO:0006351

transcription, DNA-dependent

PMID:20174553[1]

ECO:0000315

P

Figure 1A, 1B, Table 2.

complete
CACAO 2307

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002933167
SGD:S000001019

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002933167
UniProtKB:Q4WY67

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002933167
SGD:S000001019
UniProtKB:P0CS62

C

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013087

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 O'Meara, TR et al. (2010) Interaction of Cryptococcus neoformans Rim101 and protein kinase A regulates capsule. PLoS Pathog. 6 e1000776 PubMed GONUTS page
  2. 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page