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CRIGR:SDC1

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Species (Taxon ID) Cricetulus griseus (Chinese hamster) (Cricetulus barabensis griseus). (10029)
Gene Name(s) SDC1
Protein Name(s) Syndecan-1

SYND1

External Links
UniProt P47951
EMBL L38991
PIR I48125
RefSeq NP_001230971.1
GeneID 100689057
KEGG cge:100689057
CTD 6382
HOVERGEN HBG017783
KO K06257
GO GO:0016021
InterPro IPR003585
IPR001050
IPR027789
PANTHER PTHR10915
Pfam PF01034
SMART SM00294
PROSITE PS00964

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0060140

syncytium formation by plasma membrane fusion of virally targeted cells

PMID:21957484[1]

ECO:0000315

P

Fig. 2 (except A), Fig. 3, Fig. 4C, and Table 1

complete
CACAO 2401

involved_in

GO:0060140

modulation by virus of syncytium formation via plasma membrane fusion

PMID:21957484[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1903553

positive regulation of extracellular exosome assembly

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P18827
ensembl:ENSP00000370542

P

Seeded From UniProt

complete

involved_in

GO:1903543

positive regulation of exosomal secretion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P18827
ensembl:ENSP00000370542

P

Seeded From UniProt

complete

involved_in

GO:0055002

striated muscle cell development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P18827
ensembl:ENSP00000370542

P

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P18827
ensembl:ENSP00000370542

F

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P18827
ensembl:ENSP00000370542

C

Seeded From UniProt

complete

enables

GO:0008022

protein C-terminus binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P18827
ensembl:ENSP00000370542

F

Seeded From UniProt

complete

involved_in

GO:0060070

canonical Wnt signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P18828
ensembl:ENSMUSP00000020911

P

Seeded From UniProt

complete

involved_in

GO:0048627

myoblast development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P18828
ensembl:ENSMUSP00000020911

P

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P18828
ensembl:ENSMUSP00000020911

C

Seeded From UniProt

complete

part_of

GO:0009897

external side of plasma membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P18828
ensembl:ENSMUSP00000020911

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001050

C

Seeded From UniProt

complete

involved_in

GO:0042060

wound healing

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR031190

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472
UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0964
UniProtKB-SubCell:SL-0243

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

part_of

GO:0070062

extracellular exosome

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0466

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Karasneh, GA et al. (2011) An important role for syndecan-1 in herpes simplex virus type-1 induced cell-to-cell fusion and virus spread. PLoS ONE 6 e25252 PubMed GONUTS page