CHICK:XRN2

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	XRN2
Protein Name(s)	5'-3' exoribonuclease 2
External Links
UniProt	Q5ZIP4
EMBL	AJ720740
RefSeq	NP_001026204.1
UniGene	Gga.8002
STRING	9031.ENSGALP00000013622
PaxDb	Q5ZIP4
PRIDE	Q5ZIP4
Ensembl	ENSGALT00000013637
GeneID	421236
KEGG	gga:421236
CTD	22803
eggNOG	COG5049
GeneTree	ENSGT00670000098098
HOGENOM	HOG000205514
HOVERGEN	HBG036677
InParanoid	Q5ZIP4
KO	K12619
OMA	MMVEIFK
OrthoDB	EOG7S7SCW
PhylomeDB	Q5ZIP4
TreeFam	TF105977
NextBio	20824031
PRO	PR:Q5ZIP4
Proteomes	UP000000539
GO	GO:0016235 GO:0016020 GO:0005730 GO:0008409 GO:0004534 GO:0044822 GO:0008270 GO:0016049 GO:0000738 GO:0006353 GO:0006397 GO:0006355 GO:0007283
InterPro	IPR027073 IPR017151 IPR004859 IPR001878
PANTHER	PTHR12341
Pfam	PF03159
PIRSF	PIRSF037239
SMART	SM00343

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
enables	GO:0008409	5'-3' exonuclease activity	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q9H0D6	F		Seeded From UniProt	complete
part_of	GO:0005730	nucleolus	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q9H0D6	C		Seeded From UniProt	complete
involved_in	GO:0000738	DNA catabolic process, exonucleolytic	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q9H0D6	P		Seeded From UniProt	complete
involved_in	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004534	P		Seeded From UniProt	complete
part_of	GO:0016235	aggresome	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9H0D6 ensembl:ENSP00000366396	C		Seeded From UniProt	complete
enables	GO:0008409	5'-3' exonuclease activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9H0D6 ensembl:ENSP00000366396	F		Seeded From UniProt	complete
involved_in	GO:0007283	spermatogenesis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9H0D6 ensembl:ENSP00000366396	P		Seeded From UniProt	complete
part_of	GO:0005730	nucleolus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9H0D6 ensembl:ENSP00000366396	C		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9H0D6 ensembl:ENSP00000366396	C		Seeded From UniProt	complete
enables	GO:0001147	transcription termination site sequence-specific DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9H0D6 ensembl:ENSP00000366396	F		Seeded From UniProt	complete
involved_in	GO:0000738	DNA catabolic process, exonucleolytic	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9H0D6 ensembl:ENSP00000366396	P		Seeded From UniProt	complete
involved_in	GO:0016070	RNA metabolic process	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9DBR1 ensembl:ENSMUSP00000028921	P		Seeded From UniProt	complete
involved_in	GO:0007283	spermatogenesis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q9DBR1 ensembl:ENSMUSP00000028921	P		Seeded From UniProt	complete
enables	GO:0003676	nucleic acid binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR004859	F		Seeded From UniProt	complete
enables	GO:0004527	exonuclease activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR004859	F		Seeded From UniProt	complete
enables	GO:0004534	5'-3' exoribonuclease activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR017151	F		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR017151	C		Seeded From UniProt	complete
involved_in	GO:0006139	nucleobase-containing compound metabolic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR017151	P		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539	C		Seeded From UniProt	complete
enables	GO:0004518	nuclease activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0540	F		Seeded From UniProt	complete
involved_in	GO:0006353	DNA-templated transcription, termination	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0806	P		Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F		Seeded From UniProt	complete
enables	GO:0016787	hydrolase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0378	F		Seeded From UniProt	complete
enables	GO:0004527	exonuclease activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0269	F		Seeded From UniProt	complete
involved_in	GO:0006397	mRNA processing	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0507	P		Seeded From UniProt	complete
part_of	GO:0005730	nucleolus	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0188	C		Seeded From UniProt	complete
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References

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