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CHICK:TOP2B
Contents
| Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
| Gene Name(s) | TOP2B | |
| Protein Name(s) | DNA topoisomerase 2-beta
DNA topoisomerase II, beta isozyme | |
| External Links | ||
| UniProt | O42131 | |
| EMBL | AB007446 | |
| RefSeq | NP_990413.1 | |
| UniGene | Gga.30963 | |
| ProteinModelPortal | O42131 | |
| SMR | O42131 | |
| STRING | 9031.ENSGALP00000018410 | |
| PaxDb | O42131 | |
| PRIDE | O42131 | |
| GeneID | 395966 | |
| KEGG | gga:395966 | |
| CTD | 7155 | |
| eggNOG | COG0187 | |
| HOGENOM | HOG000216693 | |
| HOVERGEN | HBG052998 | |
| InParanoid | O42131 | |
| KO | K03164 | |
| PhylomeDB | O42131 | |
| NextBio | 20816031 | |
| PRO | PR:O42131 | |
| Proteomes | UP000000539 | |
| GO | GO:0005654 GO:0005524 GO:0008301 GO:0003918 GO:0046872 GO:0006200 GO:0006265 | |
| Gene3D | 1.10.268.10 3.30.1360.40 3.30.230.10 3.30.565.10 3.40.50.670 3.90.199.10 | |
| InterPro | IPR024946 IPR012542 IPR003594 IPR020568 IPR014721 IPR028467 IPR001241 IPR002205 IPR013758 IPR013757 IPR013506 IPR013759 IPR013760 IPR018522 IPR006171 | |
| PANTHER | PTHR10169:SF36 | |
| Pfam | PF00204 PF00521 PF08070 PF02518 PF01751 | |
| PRINTS | PR00418 | |
| SMART | SM00387 SM00433 SM00434 | |
| SUPFAM | SSF54211 SSF55874 SSF56719 | |
| PROSITE | PS00177 PS50880 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
NOT|part_of |
GO:0000792 |
heterochromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003916 |
DNA topoisomerase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006265 |
DNA topological change |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003918 |
DNA topoisomerase type II (ATP-hydrolyzing) activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0044774 |
mitotic DNA integrity checkpoint |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000018888 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003732 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000819 |
sister chromatid segregation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003732 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0000712 |
resolution of meiotic recombination intermediates |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000018888 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001154 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003918 |
DNA topoisomerase type II (ATP-hydrolyzing) activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001154 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001154 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006259 |
DNA metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006265 |
DNA topological change |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001154 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003918 |
DNA topoisomerase type II (ATP-hydrolyzing) activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0061505 |
DNA topoisomerase II activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003916 |
DNA topoisomerase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016853 |
isomerase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Niimi, A et al. (2001) Co-localization of chicken DNA topoisomerase IIalpha, but not beta, with sites of DNA replication and possible involvement of a C-terminal region of alpha through its binding to PCNA. Chromosoma 110 102-14 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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